Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00400 ATGCGTGTCCTCTTTGTTTTTCTGTTTTTCCATTTTCATTTCCCTGAAACCCTTTCTGCCCCAATCTCAGAGTACCGCGCCCTTCTCTCTCTCCGTTCAGTCATTACCGACGCCACACCACCCGTTCTCTCTTCTTGGAACGCCTCCATCCCTTACTGTTCCTGGCTCGGCGTCACCTGCGACAACCGCCGCCACGTCACCGCCCTCAACCTCACCGGCCTCGACCTCTCCGGCACGCTCTCTGCCGACGTCGCCCACCTCCCTTTCCTCTCCAACCTCTCCCTCGCCGCAAACAAATTCTCCGGCCCCATTCCTCCCTCTCTCTCCGCCCTCTCCGGCCTCCGCTACCTCAACCTCTCCAACAATGTCTTCAACGAAACCTTCCCCTCGGAGCTTTGGCGCCTCCAGAGCCTCGAGGTCCTCGACCTCTACAACAACAACATGACCGGCGTGCTCCCTCTTGCCGTCGCGCAGATGCAGAATCTTCGTCATTTGCATCTCGGCGGCAACTTCTTCTCCGGCCAGATCCCGCCGGAGTACGGACGCTGGCAGCGCCTCCAGTACCTCGCCGTCTCCGGCAACGAACTCGACGGGACTATCCCGCCGGAGATCGGAAACTTGACCAGCCTCCGGGAGCTCTACATCGGCTACTACAACACCTACACCGGCGGCATTCCGCCGGAGATCGGAAACTTGTCGGAGCTGGTGAGGCTTGACGTAGCGTACTGTGCGTTGTCCGGGGAGATTCCGGCGGCGCTTGGGAAGCTTCAGAAGCTGGACACGCTGTTCCTTCAGGTGAATGCATTGTCAGGATCACTGACGCCGGAGCTGGGGAACCTGAAGAGCCTGAAATCCATGGATTTGTCTAACAACATGCTCTCCGGTGAGATTCCGGCGAGTTTCGGCGAGCTGAAGAATATTACGCTTCTGAATCTGTTCAGGAACAAGCTTCATGGAGCTATACCGGAGTTTATAGGAGAGCTTCCAGCGTTGGAAGTTGTGCAACTGTGGGAAAATAACTTAACAGGTAGCATTCCTGAGGGTTTGGGCAAAAATGGGAGACTCAACCTTGTTGATCTTTCTTCTAACAAGTTAACCGGGACTTTGCCTCCTTATCTCTGTTCTGGGAATACTCTTCAGACTCTGATAACTCTTGGGAATTTTCTTTTCGGTCCAATTCCTGAGTCGCTCGGGACTTGTGAATCTCTTACACGGATTAGAATGGGAGAAAACTTTTTGAATGGTTCCATTCCTAAAGGGCTTTTTGGACTTCCCAAACTCACCCAGGTTGAACTTCAGGATAATTATCTCTCTGGAGAGTTTCCTGAGGTTGGTTCTGTTGCGGTTAATCTTGGTCAGATTACTCTCTCTAACAACCAGCTTTCTGGGGCTCTGTCTCCCTCCATTGGTAACTTCTCCAGCGTGCAGAAGCTCCTTCTTGATGGCAACATGTTCACCGGTCGGATACCTACACAGATTGGGAGGTTGCAACAGCTTTCTAAGATTGATTTTAGTGGCAACAAGTTCTCGGGTCCTATTGCGCCTGAGATCAGTCAGTGTAAGCTGTTAACTTTCCTGGACCTTAGCCGCAATGAGCTATCTGGAGACATCCCTAATGAGATAACTGGCATGAGGATATTGAATTACTTGAATCTTTCTAAGAATCATTTAGTGGGTAGCATTCCCTCTTCGATATCATCTATGCAAAGCTTGACTTCTGTTGATTTTTCATACAACAACCTGTCTGGTTTGGTGCCTGGTACCGGTCAATTCAGCTACTTCAACTACACGTCTTTCTTGGGAAACCCTGACCTGTGTGGCCCCTATTTGGGTGCTTGCAAGGGTGGGGTTGCCAATGGTGCACACCAACCTCATGTTAAAGGACTCTCCTCTTCTTTGAAGCTGCTACTTGTTGTTGGGTTGCTATTATGTTCCATTGCTTTTGCTGTGGCTGCAATATTCAAGGCCCGGTCATTAAAGAAGGCCAGTGAGGCTCGTGCATGGAAGTTGACTGCGTTCCAGCGTTTGGACTTCACTGTTGATGATGTTTTGCATTGCTTGAAAGAGGATAATATTATTGGGAAAGGAGGTGCTGGAATTGTCTACAAAGGGGCTATGCCTAATGGGGATCATGTTGCTGTGAAAAGGCTTCCAGCTATGAGTAGAGGCTCTTCCCATGATCACGGATTCAATGCTGAGATTCAGACATTGGGGCGAATCCGACACAGGCACATTGTTAGGTTGTTGGGTTTCTGTTCAAATCATGAGACAAACCTTTTGGTCTATGAGTACATGCCCAATGGAAGTTTAGGTGAGGTTCTTCATGGAAAAAAGGGGGGTCATTTGCATTGGGACACCAGGTATAAAATTGCGGTGGAGGCTGCCAAGGGGCTTTGCTATCTGCACCATGATTGTTCGCCACTCATTGTCCATCGTGATGTGAAGTCAAACAACATCCTTCTTGATTCAAATCATGAAGCCCATGTTGCTGATTTTGGGCTTGCTAAGTTCCTGCAAGATTCTGGGACATCTGAATGCATGTCTGCTATTGCTGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACATTGAAAGTTGATGAGAAAAGCGATGTGTACAGTTTTGGTGTGGTTCTTTTAGAACTTATAACAGGCAGGAAACCAGTTGGTGAATTTGGTGATGGCGTGGACATCGTGCAATGGGTGAGGAAAATGACGGACTCTAACAAGGAAGGAGTTCTTAAAGTTCTTGATCCTAGGCTTCCCTCAGTTCCCCTTCACGAAGTGATGCATGTTTTCTATGTGGCCATGCTGTGTGTTGAAGAACAGGCTGTAGAGAGACCAACAATGCGTGAAGTTGTTCAAATACTGACCGAGCTTCCAAAGCCACCTGGCTCTAAAGAGGGAGACTTAACAATAACAGAATCCTCTTTGTCATCATCAAACGCTTTAGAATCTCCATCCTCAGCCTCCAAGGAAGATCAAAATCCTCCTCAATCCCCACCACCCGACCTTCTTAGTATTTAA 3030 0.4901 MRVLFVFLFFHFHFPETLSAPISEYRALLSLRSVITDATPPVLSSWNASIPYCSWLGVTCDNRRHVTALNLTGLDLSGTLSADVAHLPFLSNLSLAANKFSGPIPPSLSALSGLRYLNLSNNVFNETFPSELWRLQSLEVLDLYNNNMTGVLPLAVAQMQNLRHLHLGGNFFSGQIPPEYGRWQRLQYLAVSGNELDGTIPPEIGNLTSLRELYIGYYNTYTGGIPPEIGNLSELVRLDVAYCALSGEIPAALGKLQKLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNMLSGEIPASFGELKNITLLNLFRNKLHGAIPEFIGELPALEVVQLWENNLTGSIPEGLGKNGRLNLVDLSSNKLTGTLPPYLCSGNTLQTLITLGNFLFGPIPESLGTCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLSGEFPEVGSVAVNLGQITLSNNQLSGALSPSIGNFSSVQKLLLDGNMFTGRIPTQIGRLQQLSKIDFSGNKFSGPIAPEISQCKLLTFLDLSRNELSGDIPNEITGMRILNYLNLSKNHLVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKGGVANGAHQPHVKGLSSSLKLLLVVGLLLCSIAFAVAAIFKARSLKKASEARAWKLTAFQRLDFTVDDVLHCLKEDNIIGKGGAGIVYKGAMPNGDHVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNHEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGSKEGDLTITESSLSSSNALESPSSASKEDQNPPQSPPPDLLSI 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00400 1009 SUPERFAMILY Protein kinase-like (PK-like) 683 958 IPR011009 -
Gma11g00400 1009 Gene3D Ribonuclease Inhibitor 356 616 IPR032675 -
Gma11g00400 1009 Gene3D Phosphorylase Kinase; domain 1 653 764 - -
Gma11g00400 1009 SMART serkin_6 687 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00400 1009 SMART LRR_typ_2 328 352 IPR003591 -
Gma11g00400 1009 SMART LRR_typ_2 135 158 IPR003591 -
Gma11g00400 1009 SMART LRR_typ_2 568 591 IPR003591 -
Gma11g00400 1009 SMART LRR_typ_2 159 183 IPR003591 -
Gma11g00400 1009 SMART LRR_typ_2 111 134 IPR003591 -
Gma11g00400 1009 SMART LRR_typ_2 280 304 IPR003591 -
Gma11g00400 1009 SUPERFAMILY L domain-like 297 613 - -
Gma11g00400 1009 MobiDBLite consensus disorder prediction 961 1009 - -
Gma11g00400 1009 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Gma11g00400 1009 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 999 - -
Gma11g00400 1009 Gene3D Transferase(Phosphotransferase) domain 1 765 971 - -
Gma11g00400 1009 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 999 - -
Gma11g00400 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Gma11g00400 1009 Pfam Leucine Rich Repeat 282 304 IPR001611 GO:0005515
Gma11g00400 1009 Pfam Leucine Rich Repeat 161 177 IPR001611 GO:0005515
Gma11g00400 1009 Pfam Protein tyrosine and serine/threonine kinase 689 958 IPR001245 GO:0004672|GO:0006468
Gma11g00400 1009 Gene3D Ribonuclease Inhibitor 22 177 IPR032675 -
Gma11g00400 1009 SUPERFAMILY RNI-like 69 390 - -
Gma11g00400 1009 MobiDBLite consensus disorder prediction 971 996 - -
Gma11g00400 1009 Pfam Leucine rich repeat 90 147 IPR001611 GO:0005515
Gma11g00400 1009 Gene3D Ribonuclease Inhibitor 178 355 IPR032675 -
Gma11g00400 1009 ProSiteProfiles Protein kinase domain profile. 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00400 Gma-Chr11 3290511 3294043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00400 11 988 Receptor kinase-like Gene Family AT5G65700 80.446 0.0 1585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma11g00400 PK_Tyr_Ser-Thr 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00400 - - gmx:548032 1964.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02009 01 55491364 55495123 Gma11g00400 11 3290511 3294043 GST
Gma11g00400 11 3290511 3294043 Gma17g01433 17 13543330 13547195 PCT
Gma11g00400 11 3290511 3294043 Gma05g01116 05 31698701 31702559 PCT
Gma17g01433 17 13543330 13547195 Gma11g00400 11 3290511 3294043 PCT
Gma05g01116 05 31698701 31702559 Gma11g00400 11 3290511 3294043 PCT