Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00397 ATGCAAGAATATTCACAATTACAACTAGGAAACTATAGGGATGTCTCGGATTTGATGGAGGATGAGGTTCTACGTTGTGATACCTGTGGGGCATCAGGGTTTGACAATGAACTCGTTGTTTGTCACAAGTGCAATGAAGGCGCAGAGCACACTTATTGTATGGATCCTGATGAGCAGTCAAAATTAGAAGCAAAACCGGAACTTCGTAAAGATTGGACATGTCAAGAGTGCATGCCGAGGGAAGGTACTAACAAATTAGTGCAAGATGAAGTTGAAGTGGCTGAAAGAAAAAGGAAGGGGCATCTATTTGAAAGTTCAACAGACTCTGAATCTCGTAAAGGCTCAAAATTAAAATCTAGATCTTCATGTACTGGTAAAAGTGGGGAAAATGGTGCTGAGTTATTATCTAGAAGACCACTAGTCCCTGTTAAAAAGTTTAAATTGAAATCGGTAAACAAAATACTTTATTCTGGGCCGGAAAGATCTAGTGGTGAAACTTCATTTCCTGGACATAGAATActggtaagtaatcacgacactcacaaagacccaaactctccaaatgcaaagaagaaaaatgaaagccagcatggtgaacagcccacaaaagctggtacatcaatgagcttgtctgaattatggacgaatcctgattttgatggaaatacctacttgagaaacctggcaagcaatcacaacactcacaaagacccaaactttctaaatggaaaggagaaaaatgagagtcagcaaggtgaacagcccacaaaagctggtacatcaatgagcttgtctgaattatggacgaatcctgattttgatggaaatacctacttgagaaacctggcaagcaatcacaacactcacaaagacccaaactttctaaatggaaaggagaaaaatgagagtcagcaaggtgaacagcccacaaaagctgctacatccatgaccatgtatgaactaaggactgatcctgcttttgatgaaaagacctacttgagaaacTTGGTGCATGTTGAGGCAGCATATCTTTCACATCGTGTTGTCCCAAAGGCTGATTACAAATGGCTAGGCAAGTTTCAGATACACAACAGTGAGGGGATTGCAAGGACTTGGGATGGGATTCAAGCTCACTTATCAAATTGTGCATCAGTTGAAGTTCTTGAAGTGGCGAATAGGCTTTCTGAGATTATTATTATATTGGAGGAACTACCTCGACTGAGGACTTGGCCATCTCAATTTATGAGAAGTCAAGTCACTGAAAATGATATCGCTCTCTACTTTTTTGCACATGATTCTGATAGCTATATATATTATGAACAATTGGTGAATTACATGATGAATAATGATTTGGCTCTGAAAGGAAATTTGGATGGGGTTGAGCTTTTAATTTTTCCATCTAACATTCTGCCTGGTTATTCCCAGTGTTGGAATGGCATGTTCTTCCTTTGGGGTGTATTCAGAGGACAAAAGGCGAATAACTCAGCCAGCACACCAGTGTCAAATTCTCTCAAGCTAAAAGATGGAGATGCTGCAACAATTTTGCCATCTGATCTCAATGTTTATCCTCAAGATGGAGATGCCGTGGCAATAATTGATGAAATTCCTGAATCTGAACCTTCAGGAGACACAGTTTTGCTGGTTGGAGAGAATTCCGATGGTAAAGGAGGAGTGGCAGATGCAGAGCATGATGCAGTTATAGAAGATATTAATGTTTCACTTTGGCCTGAAAGTGAAACACAAGAAAATGGTTCTGTTGGGATTGAGGACTCTCTTGTACCACTTTCAACTCCAGATTCAGACGAGTTGCAAGCTGCGAGTGCTTTGTTGTTGCTCGCTGAGGGTTTCATAAAGTTTTGA 1860 0.2973 MQEYSQLQLGNYRDVSDLMEDEVLRCDTCGASGFDNELVVCHKCNEGAEHTYCMDPDEQSKLEAKPELRKDWTCQECMPREGTNKLVQDEVEVAERKRKGHLFESSTDSESRKGSKLKSRSSCTGKSGENGAELLSRRPLVPVKKFKLKSVNKILYSGPERSSGETSFPGHRILVSNHDTHKDPNSPNAKKKNESQHGEQPTKAGTSMSLSELWTNPDFDGNTYLRNLASNHNTHKDPNFLNGKEKNESQQGEQPTKAGTSMSLSELWTNPDFDGNTYLRNLASNHNTHKDPNFLNGKEKNESQQGEQPTKAATSMTMYELRTDPAFDEKTYLRNLVHVEAAYLSHRVVPKADYKWLGKFQIHNSEGIARTWDGIQAHLSNCASVEVLEVANRLSEIIIILEELPRLRTWPSQFMRSQVTENDIALYFFAHDSDSYIYYEQLVNYMMNNDLALKGNLDGVELLIFPSNILPGYSQCWNGMFFLWGVFRGQKANNSASTPVSNSLKLKDGDAATILPSDLNVYPQDGDAVAIIDEIPESEPSGDTVLLVGENSDGKGGVADAEHDAVIEDINVSLWPESETQENGSVGIEDSLVPLSTPDSDELQAASALLLLAEGFIKF 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00397 619 MobiDBLite consensus disorder prediction 157 262 - -
Gma11g00397 619 Pfam PHD-finger 25 79 IPR019787 -
Gma11g00397 619 MobiDBLite consensus disorder prediction 244 262 - -
Gma11g00397 619 MobiDBLite consensus disorder prediction 175 198 - -
Gma11g00397 619 PANTHER - 5 119 - -
Gma11g00397 619 PANTHER - 343 500 - -
Gma11g00397 619 MobiDBLite consensus disorder prediction 298 314 - -
Gma11g00397 619 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 102 IPR013083 -
Gma11g00397 619 PANTHER - 343 500 - -
Gma11g00397 619 PANTHER - 5 119 - -
Gma11g00397 619 SUPERFAMILY FYVE/PHD zinc finger 15 81 IPR011011 -
Gma11g00397 619 MobiDBLite consensus disorder prediction 98 131 - -
Gma11g00397 619 SMART PHD_3 25 78 IPR001965 -
Gma11g00397 619 MobiDBLite consensus disorder prediction 199 237 - -
Gma11g00397 619 MobiDBLite consensus disorder prediction 280 314 - -
Gma11g00397 619 MobiDBLite consensus disorder prediction 98 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00397 Gma-Chr11 3250799 3256381 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Gma11g00397 PHD 1.9e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00397 - - gmx:102669922 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00397 11 3250799 3256381 Gma11g00397 11 3250799 3256381 ECH