Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00369 ATGGCGCTTTATCTTTTCTGTCGTCTTTTTGCTATCACCTTAATTTTCATGCAAACTCTGGCGGATACTTCATGCACTGATTGTTTCATTCATTCTCGGGCAGCATATTATCCAAATTCTGAAGAACACGGAACGGATGTAGGTGCATGTGGGTTTGGTTCCTTTGGGGCTACAGTCAATGGTGGAGATGTCTCAGCTGCATCTTCTCTTTATCGAAATGGTGTTGGCTGTGGTGCCTGTTACCAGgtgaggtgtaccaacagtgcctattgctcagaaaatggtgtaaatgcagttataaccgaccaaggttcaagtgataacactgatttcattcttagcaaacatgcctttagccggatggctcaaaccactgatgcagctgcttctctattagcccttggtgtggttgatattgaatatagacgtgttgcatgcagcttcccagataaaaacataacaatcaagatagatgagagcagcaacaacccttattacttggcttttgtcatttggtatcaacaaggaaggagagacataactgctgtgcagctctgtgagactcaaaactttgtgtgcaagttactggataggagccatggagcggtgtggactactacctctccaccaagaggacctttgtctttaaggatgttgtttagtgatgaagaagaggaagaagaaacatggcttgttcctgttaataacatacccggagactggaaggctggtgaaacatacgattcagggatacaagtgaaccaatag 768 0.1419 MALYLFCRLFAITLIFMQTLADTSCTDCFIHSRAAYYPNSEEHGTDVGACGFGSFGATVNGGDVSAASSLYRNGVGCGACYQVRCTNSAYCSENGVNAVITDQGSSDNTDFILSKHAFSRMAQTTDAAASLLALGVVDIEYRRVACSFPDKNITIKIDESSNNPYYLAFVIWYQQGRRDITAVQLCETQNFVCKLLDRSHGAVWTTTSPPRGPLSLRMLFSDEEEEEETWLVPVNNIPGDWKAGETYDSGIQVNQ 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00369 255 Gene3D - 149 253 IPR036749 -
Gma11g00369 255 Gene3D - 17 147 IPR036908 -
Gma11g00369 255 PANTHER EXPANSIN-B3 7 254 - -
Gma11g00369 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 249 IPR007117 -
Gma11g00369 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 151 IPR007112 -
Gma11g00369 255 Pfam Expansin C-terminal domain 153 223 IPR007117 -
Gma11g00369 255 SUPERFAMILY Barwin-like endoglucanases 18 149 IPR036908 -
Gma11g00369 255 Pfam Lytic transglycolase 67 141 IPR009009 -
Gma11g00369 255 PANTHER EXPANSIN-LIKE B1 7 254 - -
Gma11g00369 255 SUPERFAMILY PHL pollen allergen 151 249 IPR036749 -
Gma11g00369 255 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Gma11g00369 255 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Gma11g00369 255 PRINTS Expansin/Lol pI family signature 235 249 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00369 Gma-Chr11 3021842 3023878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00369 11 251 Expansin Gene Family AT4G17030 42.449 1.06e-59 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00369 - - gmx:100783848 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02045 01 55834197 55836086 Gma11g00369 11 3021842 3023878 GST
Gma11g00369 11 3021842 3023878 Gma17g01388 17 12852727 12854959 PCT
Gma11g00369 11 3021842 3023878 Gma05g00650 05 7177904 7180178 PCT
Gma17g01388 17 12852727 12854959 Gma11g00369 11 3021842 3023878 PCT
Gma05g00650 05 7177904 7180178 Gma11g00369 11 3021842 3023878 PCT