Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00355 ATGAATTGTTTCTTCTTGAAAAACAAATCAAAATCCGACGCAGAATTACCAAAGCGAAGGAAGAAGAAAAATCAGGTGGGGAATAATGGAGCAAGCAAGTCCTCCACCAGCTCGCCGCTACCATCGCCAAGGAGCATAAAAGAATTGTACAAAGAGAACGAACACAATTTCAGAATCTTCACTTTGCAAGAGCTGGTAGATGCAACACATGGCTTCAATAGGATGCTCAAGATTGGAGAAGGGGGATTCGGGAAAGTGTATAGGGGAACAATTAAACCTCACCCTGAAGATGGAGCTGATCCTATTGTCGTCGCAATTAAAAAACTTAACACGCGTGGCTTACAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCGTTGTTAACCACCCGAATTTGGTTAAGCTTCTGGGATACTGCTCCGTAGATAGTGAAAAAGGAATCCAACGGTTGTTGGTGTATGAGTTCATGTCTAACAGGAGTTTGGAAGATCATCTTTTCAGTCTTTCTTTACCTCATTTGCCTTGGAAAACAAGATTGCAAATCATGCTCGGTGCTGCTCAAGGATTACATTATCTACATAACGGATTGGAGGTTAAGGTGATCTACAGAGATTTCAAATCTTCAAATGTGTTATTGGACAAGAAATTCCATCCCAAGCTTTCAGATTTCGGTCTTGCTAGGGAGGGCCCAACGGGTGATCAGACCCATGTATCTACTGCGGTAGTAGGGACACAAGGATATGCTGCTCCAGAGTATGTCGAAACAGGTCATCTCAAAATTCAGAGTGACATATGGAGTTTCGGTGTGGTACTTTATGAGATTCTCACAGGAAGGCGTGCTTTGAATAGAAACCGTCCAATAGGGGAAAAAAAGCTTATAGAGTGGGTTAAAAACTACCCTGCTAACAGTAGCAGATTCAGCACCATCATTGACCCTCGTCTCAAGAACCAATATTCTCTTGGTGCAGCTCGGAAAGTAGCCAAGTTGGCAGATAGCTGCTTGAAGAAGAATCCTGAAGATAGACCATCCATGAGTCAGATAGTGGAAAGCTTGAAGCAAGCATTGCAGGATTCAGAAACCAAAAACGCTTAG 1101 0.4287 MNCFFLKNKSKSDAELPKRRKKKNQVGNNGASKSSTSSPLPSPRSIKELYKENEHNFRIFTLQELVDATHGFNRMLKIGEGGFGKVYRGTIKPHPEDGADPIVVAIKKLNTRGLQGHKEWLAEVQFLSVVNHPNLVKLLGYCSVDSEKGIQRLLVYEFMSNRSLEDHLFSLSLPHLPWKTRLQIMLGAAQGLHYLHNGLEVKVIYRDFKSSNVLLDKKFHPKLSDFGLAREGPTGDQTHVSTAVVGTQGYAAPEYVETGHLKIQSDIWSFGVVLYEILTGRRALNRNRPIGEKKLIEWVKNYPANSSRFSTIIDPRLKNQYSLGAARKVAKLADSCLKKNPEDRPSMSQIVESLKQALQDSETKNA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00355 366 MobiDBLite consensus disorder prediction 339 366 - -
Gma11g00355 366 Gene3D Transferase(Phosphotransferase) domain 1 159 366 - -
Gma11g00355 366 SUPERFAMILY Protein kinase-like (PK-like) 54 354 IPR011009 -
Gma11g00355 366 Pfam Protein tyrosine and serine/threonine kinase 77 354 IPR001245 GO:0004672|GO:0006468
Gma11g00355 366 MobiDBLite consensus disorder prediction 27 43 - -
Gma11g00355 366 CDD STKc_IRAK 78 356 - -
Gma11g00355 366 ProSitePatterns Protein kinases ATP-binding region signature. 78 108 IPR017441 GO:0005524
Gma11g00355 366 PANTHER OS01G0588500 PROTEIN-RELATED 7 365 - -
Gma11g00355 366 PANTHER RECEPTOR-LIKE KINASE PLANT 7 365 - -
Gma11g00355 366 MobiDBLite consensus disorder prediction 346 366 - -
Gma11g00355 366 Gene3D Phosphorylase Kinase; domain 1 52 158 - -
Gma11g00355 366 ProSiteProfiles Protein kinase domain profile. 72 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00355 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Gma11g00355 366 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00355 Gma-Chr11 2836368 2838879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00355 1 354 Glycoside Hydrolase AT3G07070 41.209 1.19e-94 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma11g00355 PK_Tyr_Ser-Thr 5.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00355 - K00924 gmx:100782248 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00355 11 2836368 2838879 Gma11g00355 11 2836368 2838879 ECH
Gma01g02061 01 56003376 56006438 Gma11g00355 11 2836368 2838879 GST
Gma11g00355 11 2836368 2838879 Gma17g01374 17 12646432 12649496 PCT
Gma11g00355 11 2836368 2838879 Gma05g00638 05 6884688 6887807 PCT
Gma17g01374 17 12646432 12649496 Gma11g00355 11 2836368 2838879 PCT
Gma05g00638 05 6884688 6887807 Gma11g00355 11 2836368 2838879 PCT