Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00348 ATGAATCCATGGAACATGAGAACTTCCAAGTTACTCTCTCAACAAGTTTCTTATCCTCCTTATCTCTTTGTAGAAGAGATTCCAAACATGGGAAATTCCAGTGTTGTGACCAAGGATGCTAGAGGTTCACAGCTGACAATCTTCTATGGTGGCCAAGTTCTTGTCTTCGATGATATTCAAGCTAAAAAAGCCAAGGACATCTTGTCTTTTGCCGGCAAGGGAATGTCTCAAAACCAGAACGATTATGCTAACACTTTCCCTGCTACAACTTCTGCTAATCCCACTAGACCATTTCCTTTTCTTATGAATATCATTCCAACCAGTGCCAACAATTCGGTTCAAGACCACCCTCAAGCACCATCCAAACCTGTTATTTGTGATCTACCATTGGCTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAAAGAAAGGATAGAATTGCTGCCAGAGCACCATATCAAACAAGCAATCACATGGCAGCCCTTAATAAGCCAGCTGAATCCATGACATGGCTCACCTTGGCACCTAAATCACCACAACAAGACGAATCTGATTCCGATAGCAGCTCCAGCTTTGTGTTATTTTAG 588 0.4235 MNPWNMRTSKLLSQQVSYPPYLFVEEIPNMGNSSVVTKDARGSQLTIFYGGQVLVFDDIQAKKAKDILSFAGKGMSQNQNDYANTFPATTSANPTRPFPFLMNIIPTSANNSVQDHPQAPSKPVICDLPLARKASLHRFLEKRKDRIAARAPYQTSNHMAALNKPAESMTWLTLAPKSPQQDESDSDSSSSFVLF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00348 195 Pfam tify domain 42 72 IPR010399 -
Gma11g00348 195 ProSiteProfiles Tify domain profile. 38 73 IPR010399 -
Gma11g00348 195 PANTHER PROTEIN TIFY 10A-LIKE 33 183 - -
Gma11g00348 195 Pfam Jas motif 129 154 IPR018467 -
Gma11g00348 195 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 33 183 IPR040390 -
Gma11g00348 195 MobiDBLite consensus disorder prediction 176 195 - -
Gma11g00348 195 SMART tify_2 38 73 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00348 Gma-Chr11 2795732 2798352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00348 36 175 Tify Gene Family AT1G19180 37.671 6.84e-26 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma11g00348 tify 6.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00348 K13464 - gmx:100306332 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02067 01 56058329 56060313 Gma11g00348 11 2795732 2798352 GST