Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00344 ATGGGCAAGCAAGGACCTTGCTATCACTGTGGAGTTACAAGCACGCCACTCTGGCGCAATGGACCACCCGAGAAGCCAGTACTATGCAATGCATGTGGGTCTCGATGGAGAACAAAGGGAACTCTTGCAAATTATACCCCTTTACATGCTCGAGCAGAAACTGATGATTATGATGATCAAAGGGTTTCCAGGATAAAGAGCATATCGATAAATAAGAAGAAAGAAGTGGCATTGCTCAAACGAAAACAGAACCATGATAATGTAATGTCTGGAGGGTTTGCACCTGATTACAACCAGGGATACCAAAAGGTTGTAGATGAAGATATTAGCAACCGGTCGAGTTCAGGATCAGCTATCTCTAACTCAGAGAGCTGTGCACAATTTGGTTATGGTGGCATGGATGCTAGTGATCTGACAGGTCCTGCTCAGTCAGTGGTCTGGGATGCCATGGTGCCTTCAAAAAAGAGGACATGTGTTGGTCGTTCAAAGCCTTCTTCTGTTGAGAAGCTAACAAAAGATTTATGTACTATTCTTCATGAACAACAGTCATATTTTTCGGCATCTTCTGAAGAAGATCTTCTTTTTGAAAGTGATACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCGTTCTCATTAGGCATCCTAGCTATATAGCTCGTGAAGAAGAGTCTGAGGCTAGCTCTCTTTCAGTTGATAATAAACAATGCCCAATGAGTGAGGCATATTCTTGTTCTGGTGGCATTCTAATGCATAATGATTCCAGTCGCTTGAAGTCTTCATCTCTGGAAGTTGAAAAGATCGGGAACTCTACTGGTCAAGGAGTGCTGCAGGAACAACTTAAAAGGCATGTTTTTTCTCAACATGAAAGAGTACAAATTCTTGGCAATCATGAATCCCCATTGTGCTCAATAGATTTAAATGATGTTGTAAACTATGAAGAGTTTTTGAGAATCTTGACAAATGAAGAGCAACAGCAATTACTGAAGTTACTTCCTGTGGTTGATACTGCTAAACTCCCTGATAGCCTTAAAGTCATGTTCAATAGCTCTCAATTCAAGGAGAACTTAACTTACTTTCAGCAGCTTCTTTCAGAAGGAGTCTTTGATATCTCTTTGTTGGGGGCAAAACCTGAAGACTGCAAGACTTTGAAAATACTTGCATTATCCAATCTGTCAAAGTCAAAATGGGTAGAACACCATAATTTTCTCAAGAAATATAAAAACAAAGCTGTAAAATCTAATACTATGGGATCTACTGGTACAGCATCAATTAATGTTTTGAACAACAGGGCATCAACTAATGTTGCAAATATCAAGAGAATGTGTGATAGCAGAAATCAAAACTTTCCAGAATTGAAGACAATAATGAGGAGCCCCAAAAGAATGATCACAAAGGCTAGTTTTGAGTGCAAAGAAGCTGTAGAAGATGGTGCTTGCTATAGTCCAAAACACCTATTTGCTTTGCCTCCTGATGCTAGTTCTCTCTTGCTGGATTCTTTCAACTTTGTTGAGGAGAGTGGTGATCAGGATCTGCTGCTAGAGGTGCCATCTAACACTTCTTTTCCACAGGCAGAGCTCTTGCACCCAACTTTAAGCCTTGGTGCTCAAGCCAGCACTGTCATTGCAATCCTTCTCTTGCTTGGGGTTCTCATTGAAGGGACGGACGCTTTCTTATCTTCGTTTCTCTTCGCTCGCTCACACTCACAGGGGTCCCACTCCTATTCCCCATCCTCCGCCGCTACGGATTTCGCTTCAACCCCAAGGGCATGTGATTTTTGGCATCTCTTGGTGGGAGTGGGAGTTTCAAGAGATGAGTATGGTTGCAAGAGAAAGCTTGTGGACATCCTTAAAACTGATTCTGAAAGTAATGCTGCAAAGAGAGTGAAGAAACCACTGGAGATCAAGAGAGACAAGCATGTTACACTTCGCGAAGAAAGTAATCATCGTGTTAAAATAAATTCCAAGGCAGTGGTAAAAGAGCAAAATAGGGAAGAGACAAGGCCTTTGGTTCTATCACATTCTAAGCATAAGTTGAAAGGGAATTTTAATGGATCACGGGTCTCATCAGACAGGAAAGTAGTACTAGGTTTGATGGCCGAATCAGAATGTCCTTGGAGGTCCGGCAAAGGTTCCTCCAAATTTAAGTTCAGTGATGCTAAAAATGAAGGCAAGAAAAAGAAAGTAGCTTCTGCATTGCCAGATAGGTCTAAAACAGCTATCAAGAGTAAAGGTGCACTAAGTTATTCTGGGCAGAAGCCTTTGAAAAAGAAAAAAGGAAATGCTACTTCTGAAGGTATGAGTGAATTAGTAATTTGGGAAAAGAAGGATAGTCTTGACCCTAATGAAAATAATGAAGACCTTCAAATTGTTCTGAAATCACATGAGTTCAATGTAAATGTTACTCCTTCTCATTCTAATTTCACTGGTGATGAGGGTGACTCAAATGTGACCCGGAAAAAAGTGATAAAAATATTGCGGTTGTTTCAAGTTGTTTTTAGAAAGCTTTTACAGGAAGTAGAATCAAAGTTAAGTGAGCGAGCAAATGGTAAAAGAGTTGATTTAATTGCTTTAAAGATCCTTAAGGAGAATGGGCATTATGTTAACTCGGGCAAGCAGATACTGGGCGCTGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAATATAGGGTGGAGCTTAATATAGTTGGCCTTCATCGTCAGATTCAGGGTGGCATCGATTATGTGAAGCACAATGGTAAGATCCTTGCAACTAGTATTGTTGCGTCAGGGGCTTATGCTGATGATTTGGATAATCCAGATGTCTTGATATATACAGGGCAGGGTGGGAATGTGATGAACCCTGATAAAGAACCTGAAGATCAGAAGCTCGAGCGGGGCAATCTTGCTCTGAAGAACAGTAGTGAGGAAAAAAATTCTGTTAGGGTGATACGTGGTTCTGAATCAATGGATGGAAAGTGCAGGATATATGTTTATGATGGATTGTATGTGGTTGAGTCTTATCAGCCTGATGTGGGACCACATGGGAAGCTGGTTTTTAAGTTTTTCCTGCGAAGAATTCCTGGTCAACCAGAGCTTGCTTTGAGGGAAGTGAAGAAATCTAAAAAGTTCAAAACAAGAGAAGGTGTATGTGTTGATGATATTTCTTATGGAAAAGAACGAATTCCGATATGTGCTGTGAACACCATAGATGATGAAAAGCCCCCTCCGTTTAATTACATAACTAGCATTATATACCCCAATTGCCATGTCCTTCCTGCAGAAGGATGTGATTGTACTAATGGATGCTCAGATTTGGAGAAATGTTCGTGTGTAGTGAAAAATGGGGGAGAGATTCCATTCAATCACAATGGGGCTATTGTACAAGCAAAACCTCTGGTCTATGAGTGTGGACCTACTTGTAAATGTCCTTCAACATGTCATAATAGAGTCAGCCAACTTGGCATAAAGTTCCAACTTGAAATATTTAAAACCGATACAAGGGGATGGGGTGTGAGATCCCTGAATTCAATCCCTTCAGGAAGTTTTATCTGTGAATATATAGGGGAGCTTCTTGAGGACAAGGAAGCTGAACAAAGAACCGGTAATGATGAGTATCTTTTTGATATTGGAAATAACTATAGCAACAGTGCTCTTTGGGATGATCTTTCGACTCTCATGCCTGATGTACACACAACTTCTTGTGAAGTTGTGAAGGATGGTGGTTTCACCATTGACGCTGCTCAGTTTGGTAATGTGGGGAGATTCATCAACCATAGTTGCTCCCCTAATCTTATTGCTCAGAATGTCCTTTATGATAACCATGACACCAGGATGCCTCACATAATGTTCTTTGCTGCTGATAACATTCCTCCCCTGCAAGAGCTGACTTATGATTACAATTATGAAATAGATCAAATTCGTGATTCTGGTGGCAATATAAAAAAGAAGTATTGCCATTGTGGTTCTGTGGAATGTACTGGCAGGATGTATTGA 3975 0.4078 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAETDDYDDQRVSRIKSISINKKKEVALLKRKQNHDNVMSGGFAPDYNQGYQKVVDEDISNRSSSGSAISNSESCAQFGYGGMDASDLTGPAQSVVWDAMVPSKKRTCVGRSKPSSVEKLTKDLCTILHEQQSYFSASSEEDLLFESDTPMVSVEIGHGSVLIRHPSYIAREEESEASSLSVDNKQCPMSEAYSCSGGILMHNDSSRLKSSSLEVEKIGNSTGQGVLQEQLKRHVFSQHERVQILGNHESPLCSIDLNDVVNYEEFLRILTNEEQQQLLKLLPVVDTAKLPDSLKVMFNSSQFKENLTYFQQLLSEGVFDISLLGAKPEDCKTLKILALSNLSKSKWVEHHNFLKKYKNKAVKSNTMGSTGTASINVLNNRASTNVANIKRMCDSRNQNFPELKTIMRSPKRMITKASFECKEAVEDGACYSPKHLFALPPDASSLLLDSFNFVEESGDQDLLLEVPSNTSFPQAELLHPTLSLGAQASTVIAILLLLGVLIEGTDAFLSSFLFARSHSQGSHSYSPSSAATDFASTPRACDFWHLLVGVGVSRDEYGCKRKLVDILKTDSESNAAKRVKKPLEIKRDKHVTLREESNHRVKINSKAVVKEQNREETRPLVLSHSKHKLKGNFNGSRVSSDRKVVLGLMAESECPWRSGKGSSKFKFSDAKNEGKKKKVASALPDRSKTAIKSKGALSYSGQKPLKKKKGNATSEGMSELVIWEKKDSLDPNENNEDLQIVLKSHEFNVNVTPSHSNFTGDEGDSNVTRKKVIKILRLFQVVFRKLLQEVESKLSERANGKRVDLIALKILKENGHYVNSGKQILGAVPGVEVGDEFQYRVELNIVGLHRQIQGGIDYVKHNGKILATSIVASGAYADDLDNPDVLIYTGQGGNVMNPDKEPEDQKLERGNLALKNSSEEKNSVRVIRGSESMDGKCRIYVYDGLYVVESYQPDVGPHGKLVFKFFLRRIPGQPELALREVKKSKKFKTREGVCVDDISYGKERIPICAVNTIDDEKPPPFNYITSIIYPNCHVLPAEGCDCTNGCSDLEKCSCVVKNGGEIPFNHNGAIVQAKPLVYECGPTCKCPSTCHNRVSQLGIKFQLEIFKTDTRGWGVRSLNSIPSGSFICEYIGELLEDKEAEQRTGNDEYLFDIGNNYSNSALWDDLSTLMPDVHTTSCEVVKDGGFTIDAAQFGNVGRFINHSCSPNLIAQNVLYDNHDTRMPHIMFFAADNIPPLQELTYDYNYEIDQIRDSGGNIKKKYCHCGSVECTGRMY 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00344 1324 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 725 1324 IPR025794 GO:0016571
Gma11g00344 1324 SMART G9a_1 871 1023 IPR003105 -
Gma11g00344 1324 Pfam Asx homology domain 291 370 IPR028020 -
Gma11g00344 1324 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Gma11g00344 1324 MobiDBLite consensus disorder prediction 707 737 - -
Gma11g00344 1324 SMART set_7 1151 1300 IPR001214 GO:0005515
Gma11g00344 1324 Pfam SAD/SRA domain 875 1023 IPR003105 -
Gma11g00344 1324 SUPERFAMILY PUA domain-like 860 1032 IPR015947 -
Gma11g00344 1324 Pfam SET domain 1162 1294 IPR001214 GO:0005515
Gma11g00344 1324 Gene3D - 3 85 IPR013088 GO:0006355|GO:0008270
Gma11g00344 1324 Pfam Pre-SET motif 1048 1143 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma11g00344 1324 PANTHER GATA TRANSCRIPTION FACTOR 26 1 541 - -
Gma11g00344 1324 ProSiteProfiles Pre-SET domain profile. 1088 1148 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma11g00344 1324 SUPERFAMILY SET domain 1035 1300 IPR046341 -
Gma11g00344 1324 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 298 410 IPR044867 -
Gma11g00344 1324 ProSiteProfiles Post-SET domain profile. 1308 1324 IPR003616 -
Gma11g00344 1324 ProSiteProfiles YDG domain profile. 876 1019 IPR003105 -
Gma11g00344 1324 Gene3D - 859 1039 IPR036987 -
Gma11g00344 1324 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Gma11g00344 1324 Gene3D SET domain 1040 1324 IPR046341 -
Gma11g00344 1324 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Gma11g00344 1324 Gene3D - 293 391 IPR038108 -
Gma11g00344 1324 CDD SET_AtSUVH-like 1069 1295 - -
Gma11g00344 1324 ProSiteProfiles SET domain profile. 1151 1294 IPR001214 GO:0005515
Gma11g00344 1324 MobiDBLite consensus disorder prediction 714 733 - -
Gma11g00344 1324 MobiDBLite consensus disorder prediction 743 762 - -
Gma11g00344 1324 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Gma11g00344 1324 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Gma11g00344 1324 PANTHER OSJNBB0038F03.10 PROTEIN 1 541 IPR044589 -
Gma11g00344 1324 SMART preset_2 1045 1135 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma11g00344 1324 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00344 Gma-Chr11 2757183 2769515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00344 1 529 C2C2-Gata Transcription Factor Family AT4G17570 53.084 2.87e-147 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma11g00344 SAD_SRA 5.3e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00344 K11420 - gmx:100776895 1457.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02071 01 56090423 56103491 Gma11g00344 11 2757183 2769515 GST