Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00329 ATGTACCATAGCTTTTATAAATATCCCCATCCATTTTCCCTTCCAAGTTCCAATATTCAATTCAACACCTTCCCTCATTCTCTTCAAATGTACGGACAAAGTTGCTACGAGTCCGATTTGGCCCTTTTGGACTCCATTCGCCGCCACTTACTCGGCGACTCCGAGGAACACAGATTCGGAGCCCCGAATGTTAATTCGGGTAGCACTCCATTGTACTCTCGGAGCTCCAGTTTCGGCAGGTTGTACCCTTGCCTGAGTAACGATTGGGGCGAACTTCCTCTTATGGAAGACGATTCAGAAGACATGCTTCTTTATGGTGTTCTTCGCGACGCCGTGAACGTAGGCTGGGTCCCATCTCTCGACGCTTCCTCACCGGAGAGTTTCTCGTCGGCTTTCATGCCGCCGGTGACCGTGAAATCCGAAACGGATCTATTTCCGGCACCGGAACCGATTTGTAACCCTCCGGTGGTTCAGGGCCCGGCGCCGGCGGTAGTTCCGGCGAAAGGGAAGCACTACCGGGGCGTGCGGCAGCGACCGTGGGGAAAATTCGCAGCGGAGATCCGCGACCCGGCTAAAAATGGGGCTCGGGTTTGGCTTGGGACTTTTGAGACGGCTGAGGACGCCGCGCTGGCTTACGATCGAGCCGCGTATCGAATGCGCGGCTCGCGGGCTTTGTTGAATTTTCCGCTCCGGATTAATTCGGGCGAGCCCGAACCGGTTCGAGTTACGGCGAAGCGGGCTTCAGCAGAACCGTGTTCTTCGTCGGAGAGTGGATCTTGGGTGAAGAAGCGGAAGAAGGTGGTGGGTTGA 810 0.5543 MYHSFYKYPHPFSLPSSNIQFNTFPHSLQMYGQSCYESDLALLDSIRRHLLGDSEEHRFGAPNVNSGSTPLYSRSSSFGRLYPCLSNDWGELPLMEDDSEDMLLYGVLRDAVNVGWVPSLDASSPESFSSAFMPPVTVKSETDLFPAPEPICNPPVVQGPAPAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRVTAKRASAEPCSSSESGSWVKKRKKVVG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00329 269 CDD AP2 170 229 IPR001471 GO:0003700|GO:0006355
Gma11g00329 269 Gene3D AP2/ERF domain 170 232 IPR036955 GO:0003700|GO:0006355
Gma11g00329 269 ProSiteProfiles AP2/ERF domain profile. 171 229 IPR001471 GO:0003700|GO:0006355
Gma11g00329 269 Pfam AP2 domain 171 221 IPR001471 GO:0003700|GO:0006355
Gma11g00329 269 SMART rav1_2 171 235 IPR001471 GO:0003700|GO:0006355
Gma11g00329 269 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2-LIKE 51 258 - -
Gma11g00329 269 MobiDBLite consensus disorder prediction 235 269 - -
Gma11g00329 269 PANTHER DNA-BINDING DOMAIN 51 258 IPR044808 GO:0003700|GO:0009873
Gma11g00329 269 SUPERFAMILY DNA-binding domain 171 231 IPR016177 GO:0003677
Gma11g00329 269 PRINTS Ethylene responsive element binding protein signature 172 183 IPR001471 GO:0003700|GO:0006355
Gma11g00329 269 PRINTS Ethylene responsive element binding protein signature 195 211 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00329 Gma-Chr11 2662858 2664032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00329 37 269 AP2-EREBP Transcription Factor Family AT4G17500 55.512 7.30e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma11g00329 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00329 K09286 - gmx:100819649 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02135 01 56697294 56699546 Gma11g00329 11 2662858 2664032 GST