Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00328 ATGGCAAACGCTCTTGAAGTCTCTGCTCTCAATCGCATCAAGCTGCATCTTTTAGGAGAACTCTCTCCCCTCACCCAATTTCAGGAACCAAACACAACCTCCCTCTGTTCCCAATCTTCAACTTCCGATTCATTCACCACAGTTGACCAAATCTTCTCCGAATTCCTCGATTTCCCAACTACTACTACTTCTTCCACAGAACAAAACCAGTTTTCTGCATTCGAGTTTGAGCCAAAACCCGAAATAATTGAGCCACAATTGGAATTCAGTTTTCCAACCACACGCTGCAAATCGAGTCGAAGGCCGTCGCTGCAAATCTCTCTCCCGAAGAAGACCGAGTGGATCCAATTTGGAGAGCCCGAGGTTACCGAAACGGTGTCGCAGAGTAACCCGAACGCGGAAGAGAAGAAGCACTACAGAGGAGTGCGACAGAGACCGTGGGGGAAGTTTGCAGCGGAGATCCGGGACCCGAACAAGCGCGGCTCCAGGGTGTGGCTTGGGACGTTCGACACGGCTATCGAAGCCGCCAAAGCCTACGACCGAGCCGCGTTCAGGCTTCGCGGCTCCAAAGCCATCCTCAACTTCCCCCTCGAAGCCGGCGCCGATGACCGCAAACGCCAAAGGGAAGAGAAGGTGGAGCCGGTGCTTGAAGTCGTCAAGAGAGAAAAGATAGGGGAATCCGACGTTAGTCTTATTAAGAATAATCCTTTAACGCCGTCTAGTTGGTTAGGGTTCTGGGGTAGTGATGCAAACGGAATATTCACCGTGCCGCCCTTGTCACCGTTATCTCCCCACCCGGCGTTGGGTTTTCCACAGCTTATGGTTGTGTGA 831 0.5211 MANALEVSALNRIKLHLLGELSPLTQFQEPNTTSLCSQSSTSDSFTTVDQIFSEFLDFPTTTTSSTEQNQFSAFEFEPKPEIIEPQLEFSFPTTRCKSSRRPSLQISLPKKTEWIQFGEPEVTETVSQSNPNAEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEAGADDRKRQREEKVEPVLEVVKREKIGESDVSLIKNNPLTPSSWLGFWGSDANGIFTVPPLSPLSPHPALGFPQLMVV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00328 276 Gene3D AP2/ERF domain 137 198 IPR036955 GO:0003700|GO:0006355
Gma11g00328 276 SUPERFAMILY DNA-binding domain 138 197 IPR016177 GO:0003677
Gma11g00328 276 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 4 261 - -
Gma11g00328 276 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 261 - -
Gma11g00328 276 SMART rav1_2 138 202 IPR001471 GO:0003700|GO:0006355
Gma11g00328 276 ProSiteProfiles AP2/ERF domain profile. 138 196 IPR001471 GO:0003700|GO:0006355
Gma11g00328 276 CDD AP2 137 196 IPR001471 GO:0003700|GO:0006355
Gma11g00328 276 Pfam AP2 domain 138 188 IPR001471 GO:0003700|GO:0006355
Gma11g00328 276 PRINTS Ethylene responsive element binding protein signature 139 150 IPR001471 GO:0003700|GO:0006355
Gma11g00328 276 PRINTS Ethylene responsive element binding protein signature 178 198 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00328 Gma-Chr11 2652135 2653083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00328 1 276 AP2-EREBP Transcription Factor Family AT5G47230 47.419 3.08e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma11g00328 AP2 5.7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00328 K09286 - gmx:100800788 525.398