Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00318 ATGGCACCCCCGAGGAATGTTGAAACTGCTAAGAAAACAAACAACAGAGGAGCATGGACCGCGGAGGAAGATCAGAAGCTAGCCCAGTGCATTGAAATTCACGGTGCAAAGAAATGGAAAACTGTTGCAATTAAATCAGgtctaaacagatgtggaaaaagttgcaggctgagatggttaaactatttgagaccaaatatcaagaggggcaaCATATCAGTTGAGGAAGAGGATTTGATTATTAGGCTTCACAAACTGCTGGGAAACAGGTGGTCATTGATAGCTAAGAGACTTCCAGGACGAACAGACAATGAAATTAAGAACTACTGGAATACTTGTTTGTGCAAAAAAGTTAATCACAAAAAGGTGAAACCTGAAACTTCAACGGCACAAACAACGCATACGACTCAGAATACCGAGGAAAGAGCAGCGGTAGAGAATAAAGAGGGCACTGATGATGGGAGTGGGGACTCAGAAGTTAACTTTGATGTGAACGAATTCTTCAACTTCTCCATTGAATCTGGACCCTTTGCGTTGGATTGGATGATCTAA 552 0.3678 MAPPRNVETAKKTNNRGAWTAEEDQKLAQCIEIHGAKKWKTVAIKSGLNRCGKSCRLRWLNYLRPNIKRGNISVEEEDLIIRLHKLLGNRWSLIAKRLPGRTDNEIKNYWNTCLCKKVNHKKVKPETSTAQTTHTTQNTEERAAVENKEGTDDGSGDSEVNFDVNEFFNFSIESGPFALDWMI 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00318 183 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Gma11g00318 183 MobiDBLite consensus disorder prediction 141 155 - -
Gma11g00318 183 Gene3D - 7 69 - -
Gma11g00318 183 MobiDBLite consensus disorder prediction 124 158 - -
Gma11g00318 183 MobiDBLite consensus disorder prediction 125 140 - -
Gma11g00318 183 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Gma11g00318 183 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Gma11g00318 183 CDD SANT 73 112 IPR001005 -
Gma11g00318 183 SUPERFAMILY Homeodomain-like 15 110 IPR009057 -
Gma11g00318 183 CDD SANT 18 63 IPR001005 -
Gma11g00318 183 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Gma11g00318 183 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Gma11g00318 183 Gene3D - 72 146 - -
Gma11g00318 183 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 4 182 - -
Gma11g00318 183 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Gma11g00318 183 SMART sant 15 65 IPR001005 -
Gma11g00318 183 SMART sant 68 116 IPR001005 -
Gma11g00318 183 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00318 Gma-Chr11 2560766 2561824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00318 11 141 MYB Transcription Factor Family AT4G34990 56.522 1.68e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma11g00318 Myb_DNA-binding 5.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00318 K09422 - gmx:100816449 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00318 11 2560766 2561824 Gma17g01324 17 11901682 11903697 PCT
Gma11g00318 11 2560766 2561824 Gma05g00583 05 5819261 5821424 PCT
Gma17g01324 17 11901682 11903697 Gma11g00318 11 2560766 2561824 PCT
Gma05g00583 05 5819261 5821424 Gma11g00318 11 2560766 2561824 PCT