Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00311 ATGGTGAAGATAACTCTTGGTACTTTCGATGACTCTTTTGGTGTTGCCTCTCTTAAGGCTTATTTGGCAGAGTTCCATGCAACTCTGATTTTCGTGTTCGCTGGTGTTGGTTCAGCCATCGCTTACAACGAGCTTACAAAAGATGCAGCCTTGGATCCAACGGGGCTGGTGGCAGTAGCTGTGGCCCATGCATTTGCACTGTTTGTAGGTGTCTCCGTCGCAGCCAACATCTCGGGTGGCCATTTGAACCCAGCTGTTACTTTTGGATTGGCCATTGGAGGCAACATCACCCTCATTACTGGTTTCTTATACTGGATTGCCCAGTTGTTGGGTTCCATTGTGGCATGCCTCCTCCTCAATTTCATCACCGCCAAGAGCATTCCAAGCCACGCACCGGCAACTGGTGTGAACGATTTTCAAGCTGTAGTGTTTGAGATTGTAATCACATTTGGGTTGGTTTACACTGTGTATGCAACTGCAGCAGACCCAAAGAAGGGGTCATTGGGTATCATTGCACCCATTGCTATTGGGTTCGTTGTGGGTGCCAACATCTTAGCAGCAGGCCCATTCAGTGGCGGTTCAATGAACCCAGCTCGCTCATTCGGCCCAGCTGTGGTCAGTGGAGACTTCGCTGCTAACTGGATCTATTGGGTTGGCCCATTGATTGGAGGAGGTTTGGCTGGCTTGATTTATGGAGACGTCTTCATTGGTTCATATGCGGCTGTCCCAGCCTCTGAAACCTACCCTTGA 750 0.4973 MVKITLGTFDDSFGVASLKAYLAEFHATLIFVFAGVGSAIAYNELTKDAALDPTGLVAVAVAHAFALFVGVSVAANISGGHLNPAVTFGLAIGGNITLITGFLYWIAQLLGSIVACLLLNFITAKSIPSHAPATGVNDFQAVVFEIVITFGLVYTVYATAADPKKGSLGIIAPIAIGFVVGANILAAGPFSGGSMNPARSFGPAVVSGDFAANWIYWVGPLIGGGLAGLIYGDVFIGSYAAVPASETYP 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00311 249 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00311 249 Gene3D Glycerol uptake facilitator protein. 2 242 IPR023271 -
Gma11g00311 249 TIGRFAM MIP: MIP family channel proteins 23 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00311 249 SUPERFAMILY Aquaporin-like 17 236 IPR023271 -
Gma11g00311 249 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Gma11g00311 249 Pfam Major intrinsic protein 15 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00311 249 PANTHER AQUAPORIN-8 1 249 IPR034294 -
Gma11g00311 249 PANTHER AQUAPORIN TIP2-2-RELATED 1 249 - -
Gma11g00311 249 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00311 249 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00311 249 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00311 249 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00311 249 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00311 249 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00311 Gma-Chr11 2513268 2516594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00311 1 246 Major Intrinsic Protein MIP AT5G47450 78.138 3.39e-134 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00311 K09873 - gmx:100527333 471.085