LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g00301	ATGGCTTCGAATCCTCCATTTCACATGGAGGATCAGACGGATGAGGATTTCTTTAATAAACTTGTTGAGGATGATATGGAGCCTCATAAGTCTGGCCATGATGAAGGGGATGATTCCGATGAGGCTAAAGCATTTGCAAATCTGGGAATCAATGATGTCGATGCTGCTGCATTTGATAATTCTGATGCTGCTGTGAGTGGTGTTGAAGTCAAAGGGGGATTGGGTACAGTGGAATCCGATGCAGGATTTGAACAAGAGGGGAATTCGTTGCCCTCCTCTAGTTCAGCTGGGTTTGATAGTAAGGTGGGTCCCGGTGAGGATGGGATTGGGGTGGGATCAGAAGTCAGGTCCGCTTCAGCTGTAGGCACGAGCAATAAAGTCAGTAGTTCTGAGGTTAAGGAGGTGGGTTGGAATTCTTTTCATGCTGATTTGAATGGAGGCGGCGGGTTTGGATCATATTCTGACTTTTTCAGTGAATTGGGAGATCAGTCTGGGGATTTTACGGGGAATGTGTACGATAATTTAAGTAGTGAGGTGAAGCAAGGTAATGAAGTTCAAAATGATGGCTCAAATGCCTTAGGTAATTATGTGCAATATCACGAGGGTCAAGGTTATGATGGATCTTTAGAAAGCCACACAAACAGGCAAGGTGATGGGTTAAATGCTTCAGTTAATCATGTACAGTATCAAGAAGGTGAAACTTATGTTGCATCTTCAGAAGAACACACAAATGGACAGGATCTGAGTAGTAGTCAGTATTGGGAGGATCTTTATCCTGGCTGGAAGTATGACTACAAAACCGGGCAATGGTATCAAATAGATGGCTATAGAGCAACAGCCACTACTCAGCAAAGCTCTGAAGCCAATATAGCTGTGGATTCGAGTGCCGCTTCTGATGGGAAAACAGAGATCTCTTACATGCAGCAAACTGCTCAATCTGTTGCAGGAACTTTAGCTGAAACTGGCACTACTAAAAATGTGTCTAGCTGGAGTCAGGTTTCAGAAGGGAATCATGGGTATCCAGAGCATATGGTTTTTGATCCTCAGTATCCTGGTTGGTATTATGACACAATTGCCCAAGAATGGCGTTCATTGGAAACTTATAATTCAACCATCCAGTCTTCTGGTCATGGACATGAAAATGGGAATGCTTCTGCCAATACATTCTCACCCAATGATCATAGTTTGTATAGTGAATACAGCCAAGCTGATAATTATGGACAACGGGACGTTGATAATCAGGCTGTAGATGGCAGCTGGAGTGGTTTGTATGGCACTAACCATAAGCAGGGTTTTGAGATGTACACAACTGGGTCAGCCACTATACGAGGGGATAATATAACTTCTGGTGGCAACCAACAGATTAATCATTCTTATGGTTCAAGTATTTCTGTGAACGAACATCAACAAAATACTTCTAGTTCTTTTGGATCCGTTGCATTGTACAATAGAGTAAACCATGATCGTGGTTTTGCTAATGGAACTTTTAAACCACAAAGCTTTGGCCCTACTGGGGACACTGTTCAACAGTTTAATTATTCAACCACAAAGTTTAGTGAACAAAAAGTTTTTTCAAATGATTTTACTGAAAATGAAAAACCCCTCAGTTATTCTCCACAATCAATTCAGGGTGGGCATCAGTATTCACATGCCCCTCATGTTGGGAGATCATCAGCTGGACGTCCTTCTCATGCTTTGGTAACTTTTGGATTTGGGGGAAAACTCATCATAATGAAAGATCCTAATCTTTTGAGCTCATCATACGGAAGCCAGGATTCTGTACAAGGTTCTGTTTCTGTGTTGAACTTGATTGAAGTTGTCACGGGAAATATGGATTCTTTGAGCATCAGACATAACACCAGTAACTATTTCCATGCTCTGAGCCAGCAATCATTCCCAGGTCCGTTGGTTGGCGGGAGTGTTGGAAGTAAGGAACTGTACAAATGGTTAGATGAGAGGATTGCACACTGCGAATCACCTGACATGGATTATAAGAAAGGTGAAAGGTTGAGACTCCTTCTTTCCTTGCTTAAAATCGGTTGTCAACATTATGGAAAGCTACGTTCTCCATTTGGTACGGACACCATACTAAAAGAAAGTGATACTCCTGAGTCAGCAGTTGCAAAACTTTTTGCATCTGCCAAGATGAGTGGCACTCAATATGGGATGCCAAGCCACTGCTTGCAAAATTTGCCTTCTGAAGGACAAATGAGGGCAATGGCTCTTGAAGTTCAAAATCTTCTTGTCTCTGGCAAAAAGAAGGAGGCTTTACAGTGTGCACAAGAAGGACAATTGTGGGGACCTGCACTTGTTCTTGCTTCACAACTTGGCGAACAGTTCTATGTTGATACAGTGAAGCAAATGGCACTTCGCCAGCTGATTGCAGGGTCACCTTTGCGCACATTATGCCTTCTAATTGCTGGGCAACCTGCTGAAGTTTTCTCTACTGATACCTCAATTAGTGAGCATCCTGGTGCTTCTAATATGGCTCAGCAGTCTTCACAGGTTGGATCCAATGGCATGCTTGATGATTGGGAGGAGAATCTGGCTGTAATAACTGCAAACAGAACCAAAGATGATGAACTTGTAATTATTCACCTTGGTGATTGCTTGTGGAAGGAAAGAAGTGAGATTACTGCCGCACACATCTGCTATTTAGTTGCTGAAGCAAATTTCGAGTCATACTCAGATAGCGCAAGACTCTGTCTAATTGGAGCAGATCACTGGAAATGTCCTCGAACTTATGCTAGTCCAGAGGCTATCCAGAGGACCGAGTTATATGAATATTCAAAGGTGGTTGGAAACTCTCAGTTTACTTTGCATCCATTTCAGCCGTATAAGCTTATATATGCATTTTTGCTAGCTGAAGTGGGGAAGGTTTCAGACTCACTGAAGTACTGCCAAGCACTACTGAAATCCTTGAAAACTGGCCGTGCTCCAGAAGTAGAGTCATGGAAGCAGTTAGCACTATCTCTTGAGGAGAGGATTAGAATTCACCAACAGGGTGGATATGCTGCAAATTTAGCTCCTGCAAAATTAGTTGGCAAATTGCTCAACTTTTTTGATAGCACTGCACATCGAGTTGTTGGTGGTTTACCACCGCCTGCTCCTTCGTCATCAGCAGGAACTGTTCATGGAAGTGAAAAACAATACCAAAATATGGCACCTAGAGTATCCTCTAGCCAATCAACAATGTCGTTGGCTCCATCTGCTTCGATGGAACCCATAAGTGAGTGGACAGCTGACAATAATAGAATGGGAAAGCCTAATAGGAGTGTTTCTGAGCCAGATTTTGGTAGAACCCCAAGACAGGAAACGACGTCACCTGATGCACAAGAAAAACCCCAGGCATCAGGGGGTACATCTCGCTTTTCCCGATTTGGTTTTGGCTCACAACTTTTGCAAAAGACAGTAGGGCTAGTCTTGAAACCTCGCTCTGGTCGACAGGCTAAATTGGGTGACAAAAATAAGTTCTATTATGATGAGAAGCTGAAGAGATGGGTGGAGGAAGGTGCTGAAGTTCCAGCTGAAGAAGCTGCTGCTCTGACACCGCCTCCAACAACTGCTGCTTTCCAGAATGGTTCAACTGAATACAACTTGAGATCTGCATTGAAAACTGAAAGTTCACCTCCTATTGAGGGCTCTAGCATAAGAACTTCTAGCCTTGAACTTAGTCCCGGGATGCCGCTGATACCACCCAGCGCAAATCAATTCTCAGCCCGGGGTCGTTTGGGTGTTCGATCAAGGTATGTTGACACCTTCAACCAAGGTGGTGGAACCTCTGCAAACTTGTTTCGGTCCCCTTCTGTTCCATCCGTGAAACCGGCTGTTGCTGCCAATGCGAAGTTTTTCATTCCTTCTGCTGCACCATCATCAAATGAGCAGACAATGGAGGCTATAGTGGAAAGCAAGCAAGAAGATAGTGCGACAAATGAAGATCCTTCAACATCTGCCACAAATGAGTGGTGGTCATACCAATCCCCTAAACAAGTATCATCAACAACCATACAAAGGTTTCCAAGTTTGGGTAACATCTCAAACCAGAGAGCAACAGAAGGAAGTAACTCTCATTTGCCTCATTCACGTCGAACATCTTCATGGAGTGGGAGTTTTAATGATTCATTTACCCCTCCAAAAATGGGTATGCCCTCGTCAAGATTTATGCCTGATGAATCTTTAATGCGTACACATGTGAAAAGTAGCAGCTATGCAGAAGATCTTCAAGAGGTTGAACTTTGA	4239	0.4343	MASNPPFHMEDQTDEDFFNKLVEDDMEPHKSGHDEGDDSDEAKAFANLGINDVDAAAFDNSDAAVSGVEVKGGLGTVESDAGFEQEGNSLPSSSSAGFDSKVGPGEDGIGVGSEVRSASAVGTSNKVSSSEVKEVGWNSFHADLNGGGGFGSYSDFFSELGDQSGDFTGNVYDNLSSEVKQGNEVQNDGSNALGNYVQYHEGQGYDGSLESHTNRQGDGLNASVNHVQYQEGETYVASSEEHTNGQDLSSSQYWEDLYPGWKYDYKTGQWYQIDGYRATATTQQSSEANIAVDSSAASDGKTEISYMQQTAQSVAGTLAETGTTKNVSSWSQVSEGNHGYPEHMVFDPQYPGWYYDTIAQEWRSLETYNSTIQSSGHGHENGNASANTFSPNDHSLYSEYSQADNYGQRDVDNQAVDGSWSGLYGTNHKQGFEMYTTGSATIRGDNITSGGNQQINHSYGSSISVNEHQQNTSSSFGSVALYNRVNHDRGFANGTFKPQSFGPTGDTVQQFNYSTTKFSEQKVFSNDFTENEKPLSYSPQSIQGGHQYSHAPHVGRSSAGRPSHALVTFGFGGKLIIMKDPNLLSSSYGSQDSVQGSVSVLNLIEVVTGNMDSLSIRHNTSNYFHALSQQSFPGPLVGGSVGSKELYKWLDERIAHCESPDMDYKKGERLRLLLSLLKIGCQHYGKLRSPFGTDTILKESDTPESAVAKLFASAKMSGTQYGMPSHCLQNLPSEGQMRAMALEVQNLLVSGKKKEALQCAQEGQLWGPALVLASQLGEQFYVDTVKQMALRQLIAGSPLRTLCLLIAGQPAEVFSTDTSISEHPGASNMAQQSSQVGSNGMLDDWEENLAVITANRTKDDELVIIHLGDCLWKERSEITAAHICYLVAEANFESYSDSARLCLIGADHWKCPRTYASPEAIQRTELYEYSKVVGNSQFTLHPFQPYKLIYAFLLAEVGKVSDSLKYCQALLKSLKTGRAPEVESWKQLALSLEERIRIHQQGGYAANLAPAKLVGKLLNFFDSTAHRVVGGLPPPAPSSSAGTVHGSEKQYQNMAPRVSSSQSTMSLAPSASMEPISEWTADNNRMGKPNRSVSEPDFGRTPRQETTSPDAQEKPQASGGTSRFSRFGFGSQLLQKTVGLVLKPRSGRQAKLGDKNKFYYDEKLKRWVEEGAEVPAEEAAALTPPPTTAAFQNGSTEYNLRSALKTESSPPIEGSSIRTSSLELSPGMPLIPPSANQFSARGRLGVRSRYVDTFNQGGGTSANLFRSPSVPSVKPAVAANAKFFIPSAAPSSNEQTMEAIVESKQEDSATNEDPSTSATNEWWSYQSPKQVSSTTIQRFPSLGNISNQRATEGSNSHLPHSRRTSSWSGSFNDSFTPPKMGMPSSRFMPDESLMRTHVKSSSYAEDLQEVEL	1412

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	1040	1090	-	-
	Gma11g00301	1412	Gene3D	-	560	982	-	-
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	82	99	-	-
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	78	100	-	-
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	1097	1128	-	-
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	1290	1327	-	-
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	1345	1379	-	-
	Gma11g00301	1412	CDD	ACE1-Sec16-like	632	1000	-	-
	Gma11g00301	1412	PANTHER	SECRETORY 16, ISOFORM I	1	1407	-	-
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	372	398	-	-
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	1	41	-	-
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	1031	1128	-	-
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	817	837	-	-
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	1345	1388	-	-
	Gma11g00301	1412	Pfam	Vesicle coat trafficking protein Sec16 mid-region	564	685	IPR024340	-
	Gma11g00301	1412	PANTHER	RGPR-RELATED	1	1407	IPR024880	GO:0006914\|GO:0048208
	Gma11g00301	1412	MobiDBLite	consensus disorder prediction	22	41	-	-
	Gma11g00301	1412	Pfam	Sec23-binding domain of Sec16	744	1002	IPR024298	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g00301	Gma-Chr11	2422891	2430704	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g00301	K20353		-	gmx:100810562	2755.7

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma01g02109	01	56433089	56442767	Gma11g00301	11	2422891	2430704	GST