Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00288 ATGGCGAGTGGGTGGATGAAGTCATTGCAATGCAAGTCCAGAGCATACCAAGACGTATACCACCCTAACTCTAAATACCTCATTCCCAGTTCCAGCTGCAGAAAGACCATCAAAGACGTCGTCGTCGACACAACCAAGCCCAGGCCCAAGCCCAATCCCAAGCCCGAAAAGCCTCTCCAGAAACACCCCAGCTCCAGATACCCTTCATCCGCCGCCAAGCCCGACTTCGAAACCACTATCAACCGATCGAGGAGCGTGACCGCCACGCGCCACGCCGACCCTCGCTTCCCTTCTCTCACCGAACTCACCGAGGGCCACCCTTCGCGGAACGTCGTGGAGATTATCTTCCACACCAGCTGGGGGCCCAAGCCCTTCTCGGGCCTGGTCGAGATGATTTTTAAAGTCCACAACGGCCCACGAACCGTCTCTCGTTTCGAGGAGTATCGCGAGGCCGTCAAGGTCCGGGCCGGAACGGGCCCGGCCCATGACTACGAGGAGAATGCGCGATGCGTTGCGGATGGGAATGAGGTCATGAGGTTTCACTGCTTGGGTCCCACCTCCGGCGGCGCTCCCTACGGCGGAGCTTGTGCCTTGTCTTTCCCCGGCGGCAAAGGGGCGGCGATCTGCACATTCTCCGGCAGCGGCGGTGCACACGAAAGCTCCGGCGGTGGCAGGGGCAGAAGGGCCATGCTGGTGTGTCGTGTCATTGCGGGTCGGATCTCGAAGCAAATCGGGTTCGTGGAATCGTTGTTGGATGGACGAGTTGGGTTCGACTCGGTCAGTGGGGACAACGGCGAGTTATTAGTGTTTGACTCGCGTGCTGTATTGCCCTGTTTTCTTATCATTTATAAATTGTAA 858 0.5816 MASGWMKSLQCKSRAYQDVYHPNSKYLIPSSSCRKTIKDVVVDTTKPRPKPNPKPEKPLQKHPSSRYPSSAAKPDFETTINRSRSVTATRHADPRFPSLTELTEGHPSRNVVEIIFHTSWGPKPFSGLVEMIFKVHNGPRTVSRFEEYREAVKVRAGTGPAHDYEENARCVADGNEVMRFHCLGPTSGGAPYGGACALSFPGGKGAAICTFSGSGGAHESSGGGRGRRAMLVCRVIAGRISKQIGFVESLLDGRVGFDSVSGDNGELLVFDSRAVLPCFLIIYKL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00288 285 MobiDBLite consensus disorder prediction 63 87 - -
Gma11g00288 285 Gene3D - 97 284 - -
Gma11g00288 285 SUPERFAMILY ADP-ribosylation 98 284 - -
Gma11g00288 285 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 284 - -
Gma11g00288 285 MobiDBLite consensus disorder prediction 39 61 - -
Gma11g00288 285 MobiDBLite consensus disorder prediction 39 98 - -
Gma11g00288 285 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00288 Gma-Chr11 2297460 2298611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00288 98 284 C2H2 Transcription Factor Family AT5G54630 36.652 9.49e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00288 - - gmx:100804686 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00288 11 2297460 2298611 Gma11g00288 11 2297460 2298611 ECH
Gma01g02120 01 56564239 56565304 Gma11g00288 11 2297460 2298611 GST