Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00282 ATGAATACTTTTTCACATGTTCCTCCTGGCTTTCGCTTCCATCCCACCGATGAAGAACTTGTTGATTACTATCTTAGGAAAAAGGTAGCTTCTAAAAGGATTGATCTAGATATCATAAAAGATGTCGATCTCTATAAAATCGAGCCATGGGATCTTCAAGAATTATGCAAAATAGGAAGCGATGAAGAAAATGAATGGTATTTCTTTAGTCATAAAGACAAGAAGTACCCCACTGGGACTCGTACCAATAGAGCTACAAAGGCAGGGTTCTGGAAGGCTACAGGAAGGGACAAGGCAATTCACTCTAGCCCTAGGCATTTCCTTATTGGCATGAGAAAGACTCTCGTCTTTTACAAAGGACGAGCCCCCAATGGACAGAAATCTGACTGGATCATGCATGAATACCGCCTAGAAACTAATCAAAATGGAACTACTCAGGAAGAAGGCTGGGTTGTATGTAGAGTGTTCAAAAAACGAATGACAACAGTGAGGAAAATGGGGGAGTATGAGTCACCATGTTGGTATGATGACCCAGCTGTCTCATTCATGCAAGAGCTTGAATCCCCAAGCAGAATTTCTAACCCTTATGCATCATACCACCAGCACTACCCTTTCAAGAAGGAGTTGGAATTGCAATTCAATATACCCCATGATGCTTTCCTCCAACTTCCACAGCTAGAGAGTCCCAAAGTTCCTCAATCTTCAACCAGTTTGAATTGTAGCCAAGTTATCCCATATGGCTATGGTAGCAATAATAATGGCAATGCTTTGCAGTCATTGTCACTCACGCAAGAGGAACACATAAAACAACATTGCCAGCAACAAAGTCTGCAATTTCCGTATGGTAGCAATGATCAAGCAGTGGACCCTGCTACGGATTGGAGAGTACTTGACAAATTTGTGGCTTCTCAGCTCAGTCACGATCAACATTTTTCCAAGGAAACAAGTTATTCCAAAGTGGCCGAACAAATTAAGTTGCTAGCAAACGGATGCACAAAAACGGAGATTGGCCAGGAGATGGCTTCAACTTCCACCCTTCCACCTCCAGTTGCCAGATTGACCTGTGGAAATGAAAGTTTATAG 1083 0.4238 MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDIIKDVDLYKIEPWDLQELCKIGSDEENEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIHSSPRHFLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNQNGTTQEEGWVVCRVFKKRMTTVRKMGEYESPCWYDDPAVSFMQELESPSRISNPYASYHQHYPFKKELELQFNIPHDAFLQLPQLESPKVPQSSTSLNCSQVIPYGYGSNNNGNALQSLSLTQEEHIKQHCQQQSLQFPYGSNDQAVDPATDWRVLDKFVASQLSHDQHFSKETSYSKVAEQIKLLANGCTKTEIGQEMASTSTLPPPVARLTCGNESL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00282 360 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Gma11g00282 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 326 - -
Gma11g00282 360 Pfam No apical meristem (NAM) protein 8 137 IPR003441 GO:0003677|GO:0006355
Gma11g00282 360 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Gma11g00282 360 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Gma11g00282 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00282 Gma-Chr11 2240632 2242381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00282 1 309 NAC Transcription Factor Family AT1G12260 61.415 1.07e-126 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma11g00282 NAM 1.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00282 - - gmx:100779370 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00282 11 2240632 2242381 Gma11g00282 11 2240632 2242381 ECH
Gma11g00282 11 2240632 2242381 Gma17g01283 17 11353781 11356902 PCT
Gma11g00282 11 2240632 2242381 Gma05g00533 05 5093059 5096337 PCT
Gma17g01283 17 11353781 11356902 Gma11g00282 11 2240632 2242381 PCT
Gma05g00533 05 5093059 5096337 Gma11g00282 11 2240632 2242381 PCT