Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00276 ATGAAAGTTCACCACTCCGTCCAACTCCTTCTTTCTCTATTTCTACTGCTTGCATTTCACGTTCCTCATATGGCTGTTGGCACTGCGGAGCTTAGAGCTCTGATGGAGTTGAAGTCCTCTCTGGATCCAGAGGGCAAGATCCTTGGGTCATGGATAAGTGATGGTGATCCATGCAGTGGCTTCTTCGAAGGGGTTGCGTGCAACGACCACCGCAAAGTGGCCAACATCTCCTTGCAGGGAAAGGGTCTTTCTGGTTGGTTATCTCCAGCACTGGCTGAACTCAAATGCTTGTCGGGTTTATACTTGCACTACAACAACCTTTCTGGTGAGATACCCCCACACATTTCAAATCTCACTGAACTGCTTGATCTCTATCTTGACGTTAATACTTTATCTGGAACTATTCCTCCTGAGATCGCCAACATGGCTAGTCTCCAAGTGTTGCAGTTGGGAGATAACCAGTTGGTGGGGACCATACCTACACAGATGAGTTCCTTAAAGCAGCTTAGTACTCTTGCTTTGCAATATAACAAGTTAACTGGTCAAATTCCTCTTAGCTTGGGGAACTTGGAGAAGCTAAGCAGGCTTAATTTGAGCTTCAACAACTTTAGTGGTACTGTTCCAGCAACACTAGCACATATTGAACATTTGGAAGTTCTAGATATTCAGAACAATTCTTTGTCGGGAATTGTTCCTTCGGCATTGAAGAGACTTGGGGAAGGATTCCAAGGTGCAAACAACCCGGGTTTGTGTGGAGTTGGGTTTTCTACTTTGAGAGCCTGCAACAAAGATCAAGATTTAAATGTTAACCATATTGATACCTCAGACGGAGACCAACCCAAAAATAGTAATTCTTCAAAGGCGCTCCCGGAGCCTGCTTATGTTCAGTTGCATTGTGGCCAGACCCATTGTTCGAAATCAAGAAGGTTTCCTCAAACTGTCATCACAGCAGGTGTTGTAATCGTTACTCTTACATTCATATGTGCTGGATTTTTGACATTCTTCAGATACCGCCGTCAAAAGCAGAGGATTAGTAATACATTAAGTTCTTCTTCAGAAGGAAAAGTTAGTCTTGACCAGCCTAAAGAGTTCTACACAAAAAGTCCATCTGCACTTGTTAATATTGACTATTATAGTGGATGGGATCAATTGTCTAATGGTCAAAATGCTGATGCTGGTGGACTATCCAATGAGTATCTAAATCAGTTCAGGTTTAATGTGGATGAGGTTGAATCTGCAACACATTACTTCTCGGAAGCCAATTTACTTAATAGGAGCAAATTCGCAGCAGGTTATAAAGGAGTTCTCAGAGATGGTTCTCTTGTGGCTATTAGAAGCATTAGTGTGACATGCTGCAAAACAGAGGAAGCTGAATTTGTAAAGGGCTTGAACTTATTAACCTCTCTGAGACATGAAAACCTTGTTAGGCTGAGAGGTTTTTGTTGCTCAAGGAGTAGAGGTGAATGTTTCCTTATCTATGACTTTGCCACCATGGGTAACCTGTCTCAATATCTCGACATAGAAGATGGAAGTAGCCATGTGCTCGAGTGGTCCAAAAGAGTCTCTATCATCAAGGGCATTGCAAACGGCATTGGATATCTTCATAGCAATGAAGAAAGCAAACCTACAATAGTTCACCAGAATATTTCAGTGGAAAATGTTCTCCTAGATTATCAGTTTAACCCATTGATCAGGGATGCTGGACTACCTATGCTTCTTGCAGATGATGTTGTTTTCTCAGCTCTAAAAGTTAGTGCCGCAATGGGATACTTAGCTCCTGAATACATCACTACAGGCCGCTTTACTGAGAAAAGTGACATATACGCATTTGGAGTAATCATTCTTCAAGTTCTATCTGGCAAGACCACAATAGGTAGTTCAATACGGACAGCAGTTGAGTCTTTCAGATTTGATGATTCTGTTGACACAAATCTCAAGGGAATATATTCTAAATCTGAAGCAGCAACACTTTCAAAGCTTGCAATACAGTGCACTAATGAGCTTCCTGACGAAAGACCAACCATGGTGGATGTGATTCAGGAGCTGAGTGTGTTATCTGCTCATTTATAA 2070 0.4203 MKVHHSVQLLLSLFLLLAFHVPHMAVGTAELRALMELKSSLDPEGKILGSWISDGDPCSGFFEGVACNDHRKVANISLQGKGLSGWLSPALAELKCLSGLYLHYNNLSGEIPPHISNLTELLDLYLDVNTLSGTIPPEIANMASLQVLQLGDNQLVGTIPTQMSSLKQLSTLALQYNKLTGQIPLSLGNLEKLSRLNLSFNNFSGTVPATLAHIEHLEVLDIQNNSLSGIVPSALKRLGEGFQGANNPGLCGVGFSTLRACNKDQDLNVNHIDTSDGDQPKNSNSSKALPEPAYVQLHCGQTHCSKSRRFPQTVITAGVVIVTLTFICAGFLTFFRYRRQKQRISNTLSSSSEGKVSLDQPKEFYTKSPSALVNIDYYSGWDQLSNGQNADAGGLSNEYLNQFRFNVDEVESATHYFSEANLLNRSKFAAGYKGVLRDGSLVAIRSISVTCCKTEEAEFVKGLNLLTSLRHENLVRLRGFCCSRSRGECFLIYDFATMGNLSQYLDIEDGSSHVLEWSKRVSIIKGIANGIGYLHSNEESKPTIVHQNISVENVLLDYQFNPLIRDAGLPMLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVLSGKTTIGSSIRTAVESFRFDDSVDTNLKGIYSKSEAATLSKLAIQCTNELPDERPTMVDVIQELSVLSAHL 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00276 689 Gene3D Phosphorylase Kinase; domain 1 383 495 - -
Gma11g00276 689 Pfam Leucine Rich Repeat 216 238 IPR001611 GO:0005515
Gma11g00276 689 Gene3D Transferase(Phosphotransferase) domain 1 497 687 - -
Gma11g00276 689 Gene3D Ribonuclease Inhibitor 28 177 IPR032675 -
Gma11g00276 689 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515
Gma11g00276 689 Gene3D Ribonuclease Inhibitor 178 247 IPR032675 -
Gma11g00276 689 ProSiteProfiles Protein kinase domain profile. 417 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00276 689 SUPERFAMILY L domain-like 30 236 - -
Gma11g00276 689 Pfam Protein tyrosine and serine/threonine kinase 425 682 IPR001245 GO:0004672|GO:0006468
Gma11g00276 689 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Gma11g00276 689 SMART LRR_typ_2 142 166 IPR003591 -
Gma11g00276 689 SMART LRR_typ_2 190 213 IPR003591 -
Gma11g00276 689 SMART LRR_typ_2 94 118 IPR003591 -
Gma11g00276 689 SMART LRR_typ_2 214 237 IPR003591 -
Gma11g00276 689 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 686 - -
Gma11g00276 689 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 7 686 - -
Gma11g00276 689 SUPERFAMILY Protein kinase-like (PK-like) 397 685 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00276 Gma-Chr11 2190622 2193887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00276 9 530 Miscellaneous Gene Families AT4G22730 56.818 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Gma11g00276 PK_Tyr_Ser-Thr 7.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00276 - - gmx:100797612 1358.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00276 11 2190622 2193887 Gma11g00276 11 2190622 2193887 ECH
Gma01g02130 01 56656234 56659641 Gma11g00276 11 2190622 2193887 GST