Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00227 ATGATGGATGGAGTTCACATTCTGTCTACACCTTATACATTGAAAGAAGCTGGGTGGATAAGCATGGTGTTGATGGTTCTTTTTACAGTCATTTGTTGCTATACATTCACCCTCATGAGATACTGCTTTGAAAGCAGAGAAGTAATCACTAGCTACCCAGACATAGGAGAAGTTGCATTAGGAAAATATGGTCGTATTATTGTTTCAATCATACTGTACACTGAATTATATTCATGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTGGCCTATTTCCTGGCACCTCGTTAGATTTGGGTAGTTTCCAGATAGACTCTGAGCACTTCTTTGGACTTTTGGCTGCACTTATTACTATCCCCACTGTTTGGCCGAAGGATCTTCGTATAATGTTTATTCTGTCAGGGTTTGTGATGACTTTAACTGGCTCTCTCTTCATTATTGTGGAGGTTGCTCGGAGTAATCTGTGGAATTCTAGGAACATATTCATCAGTGCTGGATATCGTGAACACAGTTGA 522 0.4023 MMDGVHILSTPYTLKEAGWISMVLMVLFTVICCYTFTLMRYCFESREVITSYPDIGEVALGKYGRIIVSIILYTELYSCVEFITLEGDNLTGLFPGTSLDLGSFQIDSEHFFGLLAALITIPTVWPKDLRIMFILSGFVMTLTGSLFIIVEVARSNLWNSRNIFISAGYREHS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00227 173 PANTHER OS05G0424000 PROTEIN-RELATED 1 150 - -
Gma11g00227 173 Pfam Transmembrane amino acid transporter protein 4 147 IPR013057 -
Gma11g00227 173 PANTHER AMINO ACID TRANSPORTER AVT1A 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00227 Gma-Chr11 1773315 1775285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00227 1 137 Amino Acid or Auxin Permease AAAP Family AT2G41190 68.841 3.46e-62 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00227 K15015 - gmx:100816368 233.417