Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00226 ATGAAGCCTTGCACTTCATTGTTGTTTCTCGCTTTGATTTCCGCGCTCTCGTTTGTGGTTTCTGACATGGTGCCCTCAAACGAAGTTTGGGCGCTTAGGAGCTTCAAAGAAGCTGTGTATGAAGACCCATATCAAGTTTTATCCAATTGGGATACGGTGGAATCAGATCCTTGTAACTGGTTTGGCGTCTTATGCACTATGCTTCGCGATCATGTCATCAAGCTGAACATTTCAGGATCATCATTAAAGGGGTTTCTTGCACCAGAGCTGGGGCAAATCACCTACTTGCAAGAACTAATTTTGCATGGCAACAGTTTCATTGGAACAATACCTAGAGAGTTGGGTGTGTTGGAATCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACGGGACCAATTCCTGCAGAGATTGGAAATCTAACCCAAGTTGTGAAAATAAACTTGCAGTCCAATGGGTTGACTGGTAGGCTACCTCCTGAGCTTGGAAACTTGAGATACCTTCAAGAACTTCAGCTGGATAGGAATAGGCTTCAAGGACCTGTTCCTGCTGGTGGTAGCGCAAATTTTGCTTCAAATATGCATGGGATGTATGCTTCAAAGGAGaatgtaactggcttctgtcgttcgtctcagttgaaagtagcagacttctcatttaattttttagttggtagcatacccaaatgcttggagtatcttccaagGTTAAACTTTCAAGGGAATTGCCTCCAGGGTCAGGATTTAAAGCAGCGGTCTTCTATACAGTGTGCGGGTGCTTCACCTGCCAGTGCCAAGAGCCAGCCAGTGGTGAATCCAAATCACCAACCTGCTGAATATGTGTCCAAGCATCACAGAGCATCGAAACCTGTTTGGCTTTTGGCTCTAGAAATAGTAACTGGAACTATGGTGGGCTCTCTCTTTCTGGTTGCTGTTCTTGCTGCTTTTCAGAGATGTAACAAAAAATCATCTATCATTATTCCTTGGAAAAAATCTGGAAGCCAGAAAGATCATACGGCAGTATATATAGACCCTGAGTTGTTGAAAGATGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTTGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTGTACAAGGGAACAATGAAAGGTGGGCCTGAGATTGCTGTGGTTTCCCTCTGCATCAACGAGGAGCATTGGACAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAGATAATGAGAATATAGGAAAACTGCTGGGCTATTGTAGAGAGGACACTCCATTTACAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGATCACCTACATTGTTATGAAGAAGGATGCCAATTCTCTTGGACACGGCGTATGAAGATTGCCATAGGCATTGCACGCGGACTCAAGTATTTGCATACAGAAGTGGAGCCTCCATTTACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATCCTTGAAAGATCAGAAAAGAATTCTGGTTCCATTGGCAGCCAAGGTGGTGTCTGTATTCTTCCAAATTCCCTTGAAGCACGCCATCTTGATACCAAAGGAAACACATTTGCTTTTGGGGTACTTCTGCTAGAGATAATCAGCGGGAGACCTCCATACTGTAAGGACAAAGGGTACTTGGTGGACTGGGCCAAGGACTACCTTGAAATGCCAGATGAAATGTCACATGTGGTGGATCCTGAACTGAAAATTTTTAGATATGAAGACCTCAAAGTGATATGCGAGGTAATAACTCTTTGTATCAACCCTGATACAACTGTGCGTCCATCTATGCGAGAATTATGTAGCATGCTGGAGAGCAGAATTGACACATCAGTAAGCGTGGAGCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCTTAA 1992 0.4132 MKPCTSLLFLALISALSFVVSDMVPSNEVWALRSFKEAVYEDPYQVLSNWDTVESDPCNWFGVLCTMLRDHVIKLNISGSSLKGFLAPELGQITYLQELILHGNSFIGTIPRELGVLESLKVLDLGMNQLTGPIPAEIGNLTQVVKINLQSNGLTGRLPPELGNLRYLQELQLDRNRLQGPVPAGGSANFASNMHGMYASKENVTGFCRSSQLKVADFSFNFLVGSIPKCLEYLPRLNFQGNCLQGQDLKQRSSIQCAGASPASAKSQPVVNPNHQPAEYVSKHHRASKPVWLLALEIVTGTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPELLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVVSLCINEEHWTGYLELYFQREVADLARLDNENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGGVCILPNSLEARHLDTKGNTFAFGVLLLEIISGRPPYCKDKGYLVDWAKDYLEMPDEMSHVVDPELKIFRYEDLKVICEVITLCINPDTTVRPSMRELCSMLESRIDTSVSVELKSSSLAWAELALLS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00226 663 Gene3D Phosphorylase Kinase; domain 1 338 445 - -
Gma11g00226 663 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Gma11g00226 663 Pfam Protein tyrosine and serine/threonine kinase 368 637 IPR001245 GO:0004672|GO:0006468
Gma11g00226 663 ProSiteProfiles Protein kinase domain profile. 364 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00226 663 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Gma11g00226 663 Gene3D Transferase(Phosphotransferase) domain 1 446 653 - -
Gma11g00226 663 Gene3D Ribonuclease Inhibitor 141 263 IPR032675 -
Gma11g00226 663 SUPERFAMILY Protein kinase-like (PK-like) 343 638 IPR011009 -
Gma11g00226 663 PANTHER PROTEIN MALE DISCOVERER 2 6 661 - -
Gma11g00226 663 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 661 - -
Gma11g00226 663 SUPERFAMILY L domain-like 26 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00226 Gma-Chr11 1763403 1768362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00226 1 643 Receptor kinase-like Gene Family AT2G35620 28.485 2.68e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma11g00226 PK_Tyr_Ser-Thr 4.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00226 - - gmx:100792145 1307.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00226 11 1763403 1768362 Gma11g00226 11 1763403 1768362 ECH
Gma01g02191 01 57174713 57178948 Gma11g00226 11 1763403 1768362 GST
Gma11g00226 11 1763403 1768362 Gma05g02020 05 41531480 41536077 PCT
Gma11g00226 11 1763403 1768362 Gma08g00125 08 1067146 1071369 PCT