Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00223 ATGGTCATAGCTTGCCCTTATGCTTTGGGTTTAGCAACGCCAACTGCTGTTATGGTTGGGACTGGAGTTGGTGCATCTCAGGGCGTGTTCATCAAAGGAGGCCAAGCATTGGAGAGTGCACATAAGGTGGACTGCATTGTTTTTGATAAGACGGGTACTCTCTTGAGGTGTGAATTTGCCACCCCGGTGCAGTTCATCATAAGGAGAAGGTTCTATGTTGGGGCATATAAAGCATTGCGCAAAGGTTCTGCTAACATGGATGTGTTGATAGTCTTAGGGACAAATGCAGCGTATTTCTATTCTCTTTATGTCGTGGAAAGAGCAGCTTTGTCTCGGCATTTCAAAGGCAGTGATTTCTTTGAGACCAGCTCTATGCTCATTTCGTTTATTCTGTTGGGGAAGTATTTGAAAGTGTTGGCAAAGGGAAAGACATCTCAGGCCATTGCAAAGCTTATGAACTTGACACCCGAGACAGCAACCTTGTTAACTCAAGATGATGAGGGAAGTGTGGTTAGTGAAAGACAAATTGATAGCCGGTTGATACAAAAGGACGATGTGATCAAGGTTGTTCCTCGTGCAAAAGTAGCATCGGATGGTTTTGTCATATGGGGACAAGGTCATGTATATGAGAGCACGATAACTGGAGAGGCAAAGCCTGTGGCGAAGAGGAAGGGTGATATGGTGATTGGAGGCACTGTGAATGAGAATGGGGTTTTGCACGTTAAGGTGACAAGGGTTGGATCAGAGAGTGTTCTCTCTCAGTTTGTTCGACTTGTTGAGTCTGCCCAAATGGCTAAAGCTCCTGTCCAAAAAATTGCTGATCATATTTCTAAATATTTTGTTCCTCTGCTGGAAAGTTGCATGCATACCCAAAATCTTGGATACCATCTTCCACAGATAGCTTTGAGCTTGCACTTCAGTTTGGGATTTCAGTATGTTGATCAAAGGGGGCAAGCATTAGAAAATGCACACAAGGTGAATTGCGTTGTGTTTGATAAGACATTGACCCTCACCGTTGGGAAGCCAACCCACTGGCATGACCATGATATGAGACAAAGACACCAATGCTAA 1071 0.4435 MVIACPYALGLATPTAVMVGTGVGASQGVFIKGGQALESAHKVDCIVFDKTGTLLRCEFATPVQFIIRRRFYVGAYKALRKGSANMDVLIVLGTNAAYFYSLYVVERAALSRHFKGSDFFETSSMLISFILLGKYLKVLAKGKTSQAIAKLMNLTPETATLLTQDDEGSVVSERQIDSRLIQKDDVIKVVPRAKVASDGFVIWGQGHVYESTITGEAKPVAKRKGDMVIGGTVNENGVLHVKVTRVGSESVLSQFVRLVESAQMAKAPVQKIADHISKYFVPLLESCMHTQNLGYHLPQIALSLHFSLGFQYVDQRGQALENAHKVNCVVFDKTLTLTVGKPTHWHDHDMRQRHQC 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00223 356 Gene3D - 141 263 - -
Gma11g00223 356 SUPERFAMILY HAD-like 41 158 IPR036412 -
Gma11g00223 356 PANTHER ATP7, ISOFORM B 1 54 - -
Gma11g00223 356 PANTHER ATP7, ISOFORM B 316 343 - -
Gma11g00223 356 PANTHER ATP7, ISOFORM B 52 284 - -
Gma11g00223 356 Pfam E1-E2 ATPase 154 283 - -
Gma11g00223 356 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 1 54 - -
Gma11g00223 356 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 52 284 - -
Gma11g00223 356 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 316 343 - -
Gma11g00223 356 SUPERFAMILY Calcium ATPase, transduction domain A 173 259 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00223 Gma-Chr11 1755597 1758194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00223 52 342 Primary Pumps ATPases AT1G63440 62.575 5.64e-133 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00223 K17686 - gmx:100817431 447.588