Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00207 ATGTCTTCTGATCTCTATACTTTTGACATTTCTTACCAAAGACATTCAAGCCCAGACAACATGGTCTCCTATGATGGAAATGGAAACTTTGTATTTTTCTCTGACCCTCACTCTTTCCCTTTCCTCACTGGCTCACCAATTGATGATGTTGTTCAAGGGAATTTTAACACTTCTCTTGACCCTTTTTCCTCTTCTTTCTGCTCCTTTTCTCCTCAGGAAAACCCTGTGCAACCTCTGTCTAATATAAAGGGTGAGTTTAGAAGTTTCTCTTATTTGCATGGCTCCGAAGTGACAAGTAAGGAATGCCAAATGGGTGTGGATTATACCTACAATCAGCACTTTATTTCTCAAACTTGTCATGGTTCTGAAAGTGCATCAAAGTTAATTCAAAGGAGCTTCAGCTGTACCTCTTTTGATGAGAAGCCTCGTTTCCCCTTTGAACCTCACCCTGACACTCTCATGGATTTTCAATGGCATGCTTTGAACTCCCCTGAAAACACTTTCTTCGCAGCATCAATGAGGAGAGTGTGCAGTACAGGAGATTTGCAGAACATGAAAGCAGCAGATATGTCTCAAACGGAGAGCCCCTTGTTGGAGGAAGGAAACTTCAAAGTAAGGCGTTATAGTGCCGAAGAAAGAAAAGAAAAAATCTCTAAATACAGAGCTAAGAGAAGCCAGAGGAAGTTCAATAAGACTATTAAGTATGCATGCCGAAAGACACTAGCCGACAATAGAACCCGCATACGTGGCAGATTCGCACGCAACGACGAAATCAGAGAGATTCCGAAAGCACCTTGTTCAAGTTCAACCACAGAAGAATATGAAGACGAGTTCTGGGTTGAATTCATTGAAGGATTAAATGAGGAGGTCAACGGTTAG 879 0.4175 MSSDLYTFDISYQRHSSPDNMVSYDGNGNFVFFSDPHSFPFLTGSPIDDVVQGNFNTSLDPFSSSFCSFSPQENPVQPLSNIKGEFRSFSYLHGSEVTSKECQMGVDYTYNQHFISQTCHGSESASKLIQRSFSCTSFDEKPRFPFEPHPDTLMDFQWHALNSPENTFFAASMRRVCSTGDLQNMKAADMSQTESPLLEEGNFKVRRYSAEERKEKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDEIREIPKAPCSSSTTEEYEDEFWVEFIEGLNEEVNG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00207 292 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 32 290 IPR045281 GO:0009909
Gma11g00207 292 Pfam CCT motif 213 255 IPR010402 GO:0005515
Gma11g00207 292 PANTHER CCT MOTIF FAMILY PROTEIN 32 290 - -
Gma11g00207 292 ProSiteProfiles CCT domain profile. 213 255 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00207 Gma-Chr11 1636692 1638695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00207 199 260 C2C2-CO-like Transcription Factor Family AT5G24930 41.935 1.11e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma11g00207 CCT 1.7e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00207 - - gmx:100786853 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00207 11 1636692 1638695 Gma11g00207 11 1636692 1638695 ECH
Gma01g02211 01 57336839 57338351 Gma11g00207 11 1636692 1638695 GST
Gma11g00207 11 1636692 1638695 Gma05g02055 05 41799779 41801637 PCT
Gma11g00207 11 1636692 1638695 Gma08g00158 08 1343321 1345327 PCT