Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00198 ATGTATAGGCCCAAAACTGTGGTAGCAGCAGCTGAGCTTGTTTCCGTCGCCGCTTCACCCACCGTAGCAACCATGATCATTCCCGAGAAGAACCGTAAAGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATCTGGCAAAGCACCCAGAGATTGATGTGCCGAATCTGCAGGTGATAAAGCTGATGCAGAGCTTCAAATCCAGAGAGTATGTGAGGGAGACATTTGCGTGGATGCACTATTACTGGTTCCTCACCAACGATGGAATTGAGTTCCTCAGGACATACCTCAACCTTCCTTCCGAAATTGTCCCTGCCACTCTCAAGAAGCAGGCCAAGCCCGCGGGAAGACCATTCGGTGGCCCACCCGGTGATCGCCCCAGGGGCCCACCTCGCTTTGACGGAGAGAGGAGATTCGGTGGTGACCGTGATGGATACCGTGGAGGTCCACGCGGACCTGGTGGTGATTTCGGTGACAAGGGTGGAGCTCCTGCTGACTACAGGCCTTCTTTTGGGGGTGGTCCTGGTGGAAGGCCTGGTTTTGGTCGTGGTTCCGGTGGTTATGGTGCACCAACTAGTTCAAACATTCCTTAA 615 0.5333 MYRPKTVVAAAELVSVAASPTVATMIIPEKNRKEICKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGGPGGRPGFGRGSGGYGAPTSSNIP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00198 204 Gene3D - 25 128 IPR036388 -
Gma11g00198 204 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 15 203 - -
Gma11g00198 204 PANTHER 40S RIBOSOMAL PROTEIN S10 15 203 IPR037447 -
Gma11g00198 204 MobiDBLite consensus disorder prediction 115 204 - -
Gma11g00198 204 Pfam Plectin/S10 domain 27 118 IPR005326 -
Gma11g00198 204 MobiDBLite consensus disorder prediction 136 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00198 Gma-Chr11 1552808 1554719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00198 25 178 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 82.468 2.90e-77 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00198 K02947 K09422 gmx:100797787 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00198 11 1552808 1554719 Gma11g00198 11 1552808 1554719 ECH
Gma01g02221 01 57424406 57426797 Gma11g00198 11 1552808 1554719 GST
Gma11g00198 11 1552808 1554719 Gma05g02065 05 41892883 41896957 PCT