Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00193 ATGGATTGGGATTTACAAGCTATTGTGGGATGCACCAAAGCCCCTGCAGCCACCGTGATGGACAACTCGCATCTCATGTTTTTTCAACATTTATGTCCTGAAGAACAAGATGACCTACTTTTCAATTTTCAGGAATTCTCGGAAACCACAACGGTGGTTGATGAGTTAGAAGAGCTTTACAAACCTTTCTACCCTCCTCATGTTCATGTTGATAATAACAACCCTCTTCCCATCGTTGCAAATTCCCTACCTATCCCCGATGAAGAAGTCAAAGAACTCAAACCATCACACAAAGCAGCATCTAGATGTAAAAAAAGCAAGAAGCAGCAGAAGAATAAGAGGGTGGTGACAGCAGCAGATGGTGTTTCGGACCCATGGGCATGGCGTAAATATGGGCAGAAACCAATAAAGGGGTCAGCTTATCCTCGTAGCTATTATAGATGCAGCAGCTCCAAAGGGTGTTTGGCTAGGAAACACGTGGAACGGAGCCAGTTGGATCCTGGAGTTTTGATAGTTACCTACACAGCAGAACACAGCGATCCTCACCCTACATGCAAAAACTCACAACAAAGGAACAACAGTTCCACAACCACAATTGCACCTGCAACTCCAAGAACTCATGATGGCGGAGGCTATCGAAGATGA 645 0.4496 MDWDLQAIVGCTKAPAATVMDNSHLMFFQHLCPEEQDDLLFNFQEFSETTTVVDELEELYKPFYPPHVHVDNNNPLPIVANSLPIPDEEVKELKPSHKAASRCKKSKKQQKNKRVVTAADGVSDPWAWRKYGQKPIKGSAYPRSYYRCSSSKGCLARKHVERSQLDPGVLIVTYTAEHSDPHPTCKNSQQRNNSSTTTIAPATPRTHDGGGYRR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00193 214 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 2 197 - -
Gma11g00193 214 SUPERFAMILY WRKY DNA-binding domain 118 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma11g00193 214 MobiDBLite consensus disorder prediction 176 214 - -
Gma11g00193 214 ProSiteProfiles WRKY domain profile. 117 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma11g00193 214 SMART WRKY_cls 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma11g00193 214 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 2 197 IPR044810 GO:0003700
Gma11g00193 214 Pfam WRKY DNA -binding domain 124 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma11g00193 214 Gene3D WRKY domain 104 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma11g00193 214 MobiDBLite consensus disorder prediction 180 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00193 Gma-Chr11 1517954 1518722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00193 2 200 WRKY Transcription Factor Family AT4G01250 41.150 2.31e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma11g00193 WRKY 7.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00193 K13426 - gmx:102669888 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00193 11 1517954 1518722 Gma11g00193 11 1517954 1518722 ECH
Gma11g00193 11 1517954 1518722 Gma10g02188 10 49465910 49467025 ECH
Gma11g00193 11 1517954 1518722 Gma18g02196 18 55762651 55764722 ECH
Gma11g00193 11 1517954 1518722 Gma16g00288 16 3041246 3043246 ECH
Gma01g02223 01 57442275 57443111 Gma11g00193 11 1517954 1518722 GST
Gma11g00193 11 1517954 1518722 Gma05g02071 05 41968198 41969676 PCT
Gma11g00193 11 1517954 1518722 Gma08g00174 08 1506030 1507788 PCT