Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00184 ATGGAACAGAAAAACGTATTGTTATCGGCGTTGAGTGTTGGGGTGGGAGTAGGAGTGGGAATTGGTTTGGCTGGAAAAGGCGTTACGAAATGGGGTGCTAATGAAAATTCATCTTCAAACGGCGTTACTCCGGAGAACATGGAGCGCGAAATGCTACGACTAGTTGTCGATGGCAGAGAAAGCAAGGTCACTTTTGATCAATTCCCTTATTATCTCAGAGAGCAGACACGGGTCTTGCTAACAAGTGCTGGCTATGTCCATTTGAAGCATGCGGAGGTTTCTAGGCATACGCGGAATCTTGCTCCTGCAAGCCGGACTATTCTGCTTTCAGGGCCAGCAGAACTTTACCAACAAGTGCTTGCCAAGGCTTTAGCTCACTACTTTGAGGCAAAGTTACTTCTGTTAGATTTAACTGACTTTTCACTGAAGGTGACTATGAAAAGTTTTGCTTCTTTCAAAAGGTCTATCTCCGAGACAACTTTGGAGCGGCTATCTGAGCTATTTGGTTCATTTTCTATCTTTCAACAGAGGGGAGAGCCTAAAGGGAATTTCCCCAGGCAACGCAGTGGCGTTGAGCTACTGTCAATGAAGACTGAAGGATCTAATAATCCTACCAAGATGCGTAGGAATGCGTCTGCTTCTGCAAATATCAGTAGCCTTGCTTTACAAAGCAATCCTACAAATTCAGCTCCTCAGAAGCACATAACCAGCTGGCCTTTTGATGAGAAGCTTCTCATACAAACTCTTTACAAGGTTCTAGTTTATGTGTCAAAAACCTATCCCATTGTTCTATACTTGCGGGATGTTGACAATTTGTTGTATAGATCACAAAGGATATATAATTTATTCCAGACAATGCTGAATAAACTACATGGACCAATTTTGATTCTTGGTTCACGAGTTCTAGATTATGGTAGTGACTACAGAGAAGTGGATGAGAGACTTGCTTCCCTCTTCCCCTACAACATAGAAATCAGCCCTCCAGAAGATGAATCTTGTCTTGTCAGCTGGAAGTCTCAATTTGAAGAGGACATGAAGATGATACAGATTCAGGATAACAGGAACCATATCATGGAAGTCCTTGCAGCCAATGATCTTGATTGTGATGACCTGGACTCCATCTGCGTGGCAGATACAATGGTTCTCAGTAACTATATAGAAGAGATTGTCGTGTCAGCAATTTCTTATCATTTAATGAATAGCAAAGATCCTGAATACAGAAATGGCAAATTGGTTATTCCATGCAATAGTTTGTCCCGTGCATTGGGTATATTCCAGGAGGGGAAATTCAGTGTAAATGATACATTAAAATTAGAAGCCCAAGCAGTCACGTCTGAGAGCGAAGAAGGAGCTGTTGGGGAACCAGAAAAAAAGGCAGAAAATCCTGCTCCCGGTATAAAGGCTGAATCAGATACATCAACTTCAGTGGGAAAAACTGATGGTGAAAATGCACTTCCTGTATCCAAAGTTgaagttcccccggacaatgagtttgagaagcgaataaggcctgaggtaataccagcaaaCGAGATTGGTGTAAAATTCTCGGATGTTGGTGCCTTAGATGAGACCAAAGAGTCGCTACAAGAACTAGTTATGCTTCCTCTTCGAAGGCCAGACCTTTTCCGCGGAGGCCTTCTAAAGCCTTGTAAAGGAATATTGCTGTTTGGGCCTCCTGGCACCGGGAAGACAATGCTGGCAAAGGCCATTGCGAGAGAAGCTGGCGCGAGTTTCATTAATGTATCCATGTCTACCATCACCTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGCGCTTTATTCACGCTGGCCGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTTGATAGTATGCTGGGACAGCGGACCAGAGTTGGAGAGCATGAAGCCATGCGCAAGATAAAGAATGAGTTTATGACTCATTGGGATGGACTTATGACAAACTCCGGGGAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTCGATGAAGCAATAATTAGGAGATTTGAAAGGAGAATTATGGTAGGGATGCCATCTGTCGAGAACAGGGAAAAGATTTTGAGGACTCTTTTGGCAAAAGAGAAGGTGGATGAGAAACTTGATTTTAAGGAAGTCGCAACCATGACCGAAGGATATAGCGGAAGTGATCTCAAGAACTTGTGCACAACTGCTGCTTACAGGCCTGTTAGAGAGTTAATTCAGCAAGAGAGACTAAAGACTCTGgagaaaaagcagaaggatgctggaggacagaataacgatgtccaagaagctccggatacagaagagaaagttcaacaagaaagagttattacccttagacctttgaacatgcaggacttcaaagaggctaagagtcaggttgctgcaagctacgcagctgagggggctggaatgaAGGTCCTCTCAGAACCTTACATCAAACATTGCACACAGTTGCCTTCTCAAATAAGTTCACCTGATCTTCTTACTTTCAATAAAGCACCGGCATAG 2517 0.3925 MEQKNVLLSALSVGVGVGVGIGLAGKGVTKWGANENSSSNGVTPENMEREMLRLVVDGRESKVTFDQFPYYLREQTRVLLTSAGYVHLKHAEVSRHTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKVTMKSFASFKRSISETTLERLSELFGSFSIFQQRGEPKGNFPRQRSGVELLSMKTEGSNNPTKMRRNASASANISSLALQSNPTNSAPQKHITSWPFDEKLLIQTLYKVLVYVSKTYPIVLYLRDVDNLLYRSQRIYNLFQTMLNKLHGPILILGSRVLDYGSDYREVDERLASLFPYNIEISPPEDESCLVSWKSQFEEDMKMIQIQDNRNHIMEVLAANDLDCDDLDSICVADTMVLSNYIEEIVVSAISYHLMNSKDPEYRNGKLVIPCNSLSRALGIFQEGKFSVNDTLKLEAQAVTSESEEGAVGEPEKKAENPAPGIKAESDTSTSVGKTDGENALPVSKVEVPPDNEFEKRIRPEVIPANEIGVKFSDVGALDETKESLQELVMLPLRRPDLFRGGLLKPCKGILLFGPPGTGKTMLAKAIAREAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTNSGERILVLAATNRPFDLDEAIIRRFERRIMVGMPSVENREKILRTLLAKEKVDEKLDFKEVATMTEGYSGSDLKNLCTTAAYRPVRELIQQERLKTLEKKQKDAGGQNNDVQEAPDTEEKVQQERVITLRPLNMQDFKEAKSQVAASYAAEGAGMKVLSEPYIKHCTQLPSQISSPDLLTFNKAPA 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00184 838 MobiDBLite consensus disorder prediction 467 481 - -
Gma11g00184 838 Pfam ATPase family associated with various cellular activities (AAA) 554 684 IPR003959 GO:0005524|GO:0016887
Gma11g00184 838 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 810 - -
Gma11g00184 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 514 752 IPR027417 -
Gma11g00184 838 MobiDBLite consensus disorder prediction 450 464 - -
Gma11g00184 838 SMART AAA_5 550 687 IPR003593 -
Gma11g00184 838 CDD AAA 552 684 - -
Gma11g00184 838 Gene3D - 513 769 IPR027417 -
Gma11g00184 838 MobiDBLite consensus disorder prediction 442 489 - -
Gma11g00184 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 349 IPR027417 -
Gma11g00184 838 MobiDBLite consensus disorder prediction 750 774 - -
Gma11g00184 838 ProSitePatterns AAA-protein family signature. 657 676 IPR003960 GO:0005524|GO:0016887
Gma11g00184 838 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 810 - -
Gma11g00184 838 Pfam AAA+ lid domain 708 749 IPR041569 -
Gma11g00184 838 Gene3D - 686 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00184 Gma-Chr11 1436773 1444769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00184 466 746 Calmodulin-binding Proteins AT3G56690 34.948 6.38e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00184 - - gmx:100783137 1517.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00184 11 1436773 1444769 Gma11g00184 11 1436773 1444769 ECH
Gma11g00184 11 1436773 1444769 Gma05g02080 05 42071981 42079891 PCT
Gma11g00184 11 1436773 1444769 Gma08g00183 08 1605996 1613035 PCT