Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00174 ATGGAACTTATTTTGTGCTTCATCTACTTGGTTTCTCTCATGCTCTTCCAAGCACAAGCAAATGCAATCTCTGACAAGCAAGCATTGCTTGATTTCGTGGAAAAGTTGGCTCCTTCAAGATCCCTGAATTGGAACGCAAGCTCTTCCCCATGTACCTCCTGGACCGGTGTAACCTGTAACGGAGACAAGTCACGAGTTATAGCCATTCACTTGCCAGCATTCGGGTTTCACGGAACCATCCCTCCCAACACAATAAGCCGCGTCACGGGGTTGCGAACACTCAGCCTCAGATCCAACTTCATAAATGGTCACTTCCCTTGTGATTTTTCCAATCTCAAAAACCTTTCCTTTCTCTATCTTCAGTTCAACAACTTCACGGGTCCCTTACCTGACTTCTCTGCTTGGAGGAACCTCTCTGTTGTCAACTTGTCCAATAATTTCTTCACCGGCACCATTCCTCTCTCTCTCTCCAATTTGACTCAGCTAACTTCCATGAATCTCTCCAACAACTCCCTCTCCGGGGAAATACCTCTCTCTCTTCAGAGGTTTCCCAAGTCAGCATTCGTTGGAAACAATGTCTCTCTTCAAACCTCCTCTCCTGTAGCTCCATTTTCTAAATCTGCAAAACACAGCGAAACGACCGTGTTTTGTGTTATTGTTGCTGCTTCTCTTATTGGTCTCGCAGCATTTGTTGCATTTATCTTTCTATGCTGGTCGAGAAAGAAGAAGAATGGGGATTCCTTTTCTCGGAAGTTGCAGAAGGGAGATATGTCTCCGGAAAAAGTAGTGTCGAGGGACCTGGATGCAAATAATAAAATTGTTTTCTTTGAGGGGTGTAGTTATGCTTTTGACTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTACTAGGGAAGGGGACGTTTGGTGCTGCGTATAAGGCTGCGCTGGAGGATGCTACCACTGTTGTTGTGAAGAGGTTGAAGGAGGTGGCTGTTGGAAAGAAGGATTTTGAGCAGCTTATGGAGGTTGTTGGGAATCTTAAACATGAGAATGTGGTTGAGCTGAAGGGGTATTACTATTCCAAAGATGAGAAACTCATGGTCTATGATTACTACACTCAGGGGAGTCTCTCGGCTTTCTTGCATGGTAAAAGAGGAGAGGATAGGGTGCCTCTAGATTGGGATACTCGGATGAAAATTGCTTTGGGTGCTGCACGAGGCCTTGCTTGTATACATTGTGAGAATGGTGGGAAACTTGTGCATGGCAATATCAGATCCTCAAATATCTTTCTCAATAGTAAACAGTATGGTTGTGTATCTGATCTTGGCCTGGCAACCATAATGAGTTCAGTTGCCATACCAATCTCGCGAGCCGCTGGTTACAGAGCACCTGAAGTCACAGACACGAGGAAAGCGACACAACCATCTGATGTTTACAGCTTTGGTGTGGTGTTATTAGAGCTTCTCACTGGGAAATCCCCTGTCTACACAACTGGTGCCGATGAGATTGTGCACTTGGTGAGATGGGTTCATTCGGTTGTGAGAGAGGAGTGGACAGCTGAAGTGTTTGACTTGGAGCTGATAAGATATCCCAATATAGAGGAAGAGATGGTGGAAATGTTGCAGATAGCCATGTCATGTGTGGTGAGGCTTCCTGATCAGAGGCCTAAGATGTTAGAACTTGTAAAAATGATAGAAAGTGTCAGGCAGATTGAGATAGTAGTGAATCAGCCATCAATATCATCTGAGAACCAAGTGGAAAGTTCAACACAGATCCCTTTAACCACTTAA 1770 0.4497 MELILCFIYLVSLMLFQAQANAISDKQALLDFVEKLAPSRSLNWNASSSPCTSWTGVTCNGDKSRVIAIHLPAFGFHGTIPPNTISRVTGLRTLSLRSNFINGHFPCDFSNLKNLSFLYLQFNNFTGPLPDFSAWRNLSVVNLSNNFFTGTIPLSLSNLTQLTSMNLSNNSLSGEIPLSLQRFPKSAFVGNNVSLQTSSPVAPFSKSAKHSETTVFCVIVAASLIGLAAFVAFIFLCWSRKKKNGDSFSRKLQKGDMSPEKVVSRDLDANNKIVFFEGCSYAFDLEDLLRASAEVLGKGTFGAAYKAALEDATTVVVKRLKEVAVGKKDFEQLMEVVGNLKHENVVELKGYYYSKDEKLMVYDYYTQGSLSAFLHGKRGEDRVPLDWDTRMKIALGAARGLACIHCENGGKLVHGNIRSSNIFLNSKQYGCVSDLGLATIMSSVAIPISRAAGYRAPEVTDTRKATQPSDVYSFGVVLLELLTGKSPVYTTGADEIVHLVRWVHSVVREEWTAEVFDLELIRYPNIEEEMVEMLQIAMSCVVRLPDQRPKMLELVKMIESVRQIEIVVNQPSISSENQVESSTQIPLTT 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00174 589 Pfam Protein tyrosine and serine/threonine kinase 294 557 IPR001245 GO:0004672|GO:0006468
Gma11g00174 589 PANTHER OS05G0588300 PROTEIN 15 572 - -
Gma11g00174 589 SUPERFAMILY L domain-like 39 186 - -
Gma11g00174 589 PANTHER PROTEIN, PUTATIVE-RELATED 15 572 - -
Gma11g00174 589 SUPERFAMILY Protein kinase-like (PK-like) 294 558 IPR011009 -
Gma11g00174 589 Gene3D Phosphorylase Kinase; domain 1 258 364 - -
Gma11g00174 589 ProSiteProfiles Protein kinase domain profile. 290 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00174 589 ProSitePatterns Protein kinases ATP-binding region signature. 296 327 IPR017441 GO:0005524
Gma11g00174 589 Gene3D Transferase(Phosphotransferase) domain 1 366 580 - -
Gma11g00174 589 Gene3D Ribonuclease Inhibitor 22 200 IPR032675 -
Gma11g00174 589 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00174 Gma-Chr11 1355373 1357852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00174 14 561 Receptor kinase-like Gene Family AT4G23740 62.098 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma11g00174 PK_Tyr_Ser-Thr 4.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00174 - - gmx:100780435 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00174 11 1355373 1357852 Gma11g00174 11 1355373 1357852 ECH
Gma01g02242 01 57593490 57596007 Gma11g00174 11 1355373 1357852 GST
Gma11g00174 11 1355373 1357852 Gma05g02089 05 42182772 42185553 PCT
Gma11g00174 11 1355373 1357852 Gma08g00197 08 1719688 1724017 PCT