Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00165 ATGTCCACCACCGCAACTACAACCTCTGAAGTTAGCAGCAATGAGTGGAAAGTCATACACATGAGCGAGCAAGAGGAGGATCTCATTCGCAGGATGTACAAGCTAGTCGGGGACAAGTGGAATTTGATAGCCGGTCGCATTCCCAGTCGTAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACACGGTGATGCTTTCTCTGTTAAAAGACACAGAAGTAAAGCCCAAGACTCATGA 240 0.4583 MSTTATTTSEVSSNEWKVIHMSEQEEDLIRRMYKLVGDKWNLIAGRIPSRKAEEIERFWIMRHGDAFSVKRHRSKAQDS 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00165 79 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 4 74 - -
Gma11g00165 79 Pfam Myb-like DNA-binding domain 22 60 IPR001005 -
Gma11g00165 79 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 74 - -
Gma11g00165 79 CDD SANT 21 59 IPR001005 -
Gma11g00165 79 Gene3D - 21 79 - -
Gma11g00165 79 SUPERFAMILY Homeodomain-like 22 60 IPR009057 -
Gma11g00165 79 SMART sant 17 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00165 Gma-Chr11 1286473 1289409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00165 21 59 MYB Transcription Factor Family AT5G52600 56.410 8.28e-12 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma11g00165 Myb_DNA-binding 1.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00165 K09422 - gmx:100527129 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02251 01 57680148 57685431 Gma11g00165 11 1286473 1289409 GST