Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00163 ATGCATTCGACGAAGAGTAGCACCAGCGATAATATCAATATCAATATCAAATCAAAAGATAAAGAAATCCATCGATGCTACCATAACTACCGAAAGAAGAGAAAGCGTCCTTGCCAAGACGCTGTGGCTCCCACCACGGAAGACGACAACTGCTGCACCAAGGCCGCCGCCGCATCACACGGTTTCATATCCGTTATAGGGCGGCGGCGCGTGATGGAGGATGCAGTGAAGGTGGTTACCGGTTTGGTGGCGGCGGAACAACACTGTGGCGGTTACGATTTCTTCGCGGTTTACGACGGCCACGGAGGGACCTTGGTGGCCAACGCTTGCCGCGACAGGCTGCACTTGTTGCTGGCGGAGGAAGTAGTGAGGGGGACCGCAGCAGACAAAGGGCTGGATTGGTGCCAGGTGATGTGTTCCTGTTTCATGAAGATGGACAAGGGAGTTGGTGAGGAGAACGATGATGGCGGCGGAAACACCATGGGTTCGACGGCGGCGGTGGTGGTGGTCGGAAAGGAGGAGATTGTGGTGGCCAATTGTGGAGACTCGAGGGCGGTGTTGTGCCGTGGCGGGGTAGCTGTGCCACTTTCACGTGACCATAAGCCTGATCGTCCTGATGAAAAAGAGAGGATAGAAGCGGCAGGTGGCATGGTCATTAATTGGAACGGAAATCGTGTTTTGGGAGTACTTGCTACTTCCAGATCCATAGGGGATCACTGCATGAAACCTTTTGTGATTTCACAACCAGAGACCAAGGTGTACGCACGAAAAGAGTCAGATGAGTTTGTGGTAGTGGCGAGTGACGGGCTGTGGGATGTAGTGTCTAACAAGTTTGTTTGTGAGGTTGTACGAGGTTGCCTCCATGGGAAAATGAGGAGGAATTTTAAAGAGGACTCCATTATAAGCTATGCAACAGAAGCTGCAGCGTTGTTGGCTAAGTTGGCTATGGCTCGTGGAAGCAAAGACAACATCAGTGTCATAGTCATCCAACTCAACACTACTACAACTTGA 1011 0.5163 MHSTKSSTSDNININIKSKDKEIHRCYHNYRKKRKRPCQDAVAPTTEDDNCCTKAAAASHGFISVIGRRRVMEDAVKVVTGLVAAEQHCGGYDFFAVYDGHGGTLVANACRDRLHLLLAEEVVRGTAADKGLDWCQVMCSCFMKMDKGVGEENDDGGGNTMGSTAAVVVVGKEEIVVANCGDSRAVLCRGGVAVPLSRDHKPDRPDEKERIEAAGGMVINWNGNRVLGVLATSRSIGDHCMKPFVISQPETKVYARKESDEFVVVASDGLWDVVSNKFVCEVVRGCLHGKMRRNFKEDSIISYATEAAALLAKLAMARGSKDNISVIVIQLNTTTT 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00163 336 CDD PP2Cc 59 331 IPR001932 -
Gma11g00163 336 SUPERFAMILY PP2C-like 58 332 IPR036457 -
Gma11g00163 336 Pfam Protein phosphatase 2C 61 324 IPR001932 -
Gma11g00163 336 ProSiteProfiles PPM-type phosphatase domain profile. 59 331 IPR001932 -
Gma11g00163 336 Gene3D - 52 335 IPR036457 -
Gma11g00163 336 ProSitePatterns PPM-type phosphatase domain signature. 94 102 IPR000222 GO:0043169
Gma11g00163 336 PANTHER ALPHABET, ISOFORM E-RELATED 31 333 - -
Gma11g00163 336 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 31 333 - -
Gma11g00163 336 SMART PP2C_4 49 329 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00163 Gma-Chr11 1260159 1261880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00163 56 331 PP2C-type Phosphatase Gene Family AT2G29380 48.621 6.80e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00163 K14497 - gmx:100813248 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00163 11 1260159 1261880 Gma11g00163 11 1260159 1261880 ECH
Gma01g02253 01 57711345 57712998 Gma11g00163 11 1260159 1261880 GST