Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00145 ATGGAATCCATGTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCTTCATCTCTTCAGTTCTTTTCCATGATGTCTCTCTCACTTTCACCTAGCTTAGGATCATCTCCCTATCAAATGAAATGCGAGGAAAGGGGTTTGGTATTGATCCATTTGTTGCTCGCTGGTGCTAATTTTGTAGCCACCGGTGATTTACAAAATGCAAACCTCACACTTGAGCAGATTTCCCAGCATGCCTCTCTTGATGGGGATACTATGCAGCGAATTGCTTCATATTTTTCTGAAGCACTCGCTGATCGGATACTTAGAACATGGCCCGGCATCCATAGGGCCCTCAATTCCAACAGAATACCTATGGTTTCTGATGAAATTCTTGTTCAAAAGCTCTTCTTTGAGCTTTTACCCTTCCTGAAGTTCTCATATATTCTGACAAATCAAGCTATTGTTGAAGCCATGGAAGGGGAGAAAATGGTGCATGTAATTGATCTCAATGCGGCTGGGCCGGCGCAGTGGATTGCTCTCCTCCAAGTTTTGAGTGCACGTTCTGAAGGCCCTCCACATTTGAAAATCACCGGGGTCCATCACCAGAAAGAGGTTCTGGATCAGATGGCTCATAAACTCACTGAGGAGGCAGAAAAGTTGGATATCCCATTCCAATTCAACCCTGTGCTCAGCAAGTTGGAAAATCTTGATTTCGAAAAACTTGGGGTTAAAACTGGGGAGGCACTAGCAATAAGTTCTATTATGCAGTTGCACTCCCTTTTGGCCTTGGATGACGATGCCTCTCGGAGAAAATTGCCTCTTTTGTCGAAAAACTCAAATGCAATTCACCTGCAGAAAGGTCTCCTAACAAACCAGAACACATTGGGAGATTTGCTTGACGGCTATAGCCCGAGTCCCGATTCAGCCTCAGCTTCTGCCTCATCCTCGCCAGCGTCCTCATCGGCTTCGATGAATTCGGAGAGCTTTCTTAATGCCTTGTGGGGTTTATCCCCAAAAGTAATGGTTGTAACTGAACAAGACTTTAATCACAACTGTTTGACCATGATGGAGAGGCTGGCAGAAGCTCTATTTTCTTATGCTGCATATTTTGATTGTTTGGAGTCCACGGTCTCAAGAGCTTCCTTGGACAGAATAAAACTTGAGAAGATGCTTTTTGGTGAGGAGATAAAGAACATCATAGCTTGTGAAGGATGTGAAAGAAAAAAAAGGCACGAAAGGATGGATAGGTGGATCCAAAGACTTGACTTTTCTGGCTTTGCAAACGTGCCTATTAGCTATTATGGGATGCTGCAGGGAAGGAGGTTCTTGCAGACCTATGGCTGTGAGGGTTACAAGATGAAGGAGGAATGTGGTCGGGTTATGATGTGCTGGCAGGAGCGACCCTTGTTTTTCATAACAGCTTGGACACCAAGGAAATAA 1422 0.4437 MESMFQEEGSSSVTSSSSLQFFSMMSLSLSPSLGSSPYQMKCEERGLVLIHLLLAGANFVATGDLQNANLTLEQISQHASLDGDTMQRIASYFSEALADRILRTWPGIHRALNSNRIPMVSDEILVQKLFFELLPFLKFSYILTNQAIVEAMEGEKMVHVIDLNAAGPAQWIALLQVLSARSEGPPHLKITGVHHQKEVLDQMAHKLTEEAEKLDIPFQFNPVLSKLENLDFEKLGVKTGEALAISSIMQLHSLLALDDDASRRKLPLLSKNSNAIHLQKGLLTNQNTLGDLLDGYSPSPDSASASASSSPASSSASMNSESFLNALWGLSPKVMVVTEQDFNHNCLTMMERLAEALFSYAAYFDCLESTVSRASLDRIKLEKMLFGEEIKNIIACEGCERKKRHERMDRWIQRLDFSGFANVPISYYGMLQGRRFLQTYGCEGYKMKEECGRVMMCWQERPLFFITAWTPRK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00145 473 ProSiteProfiles GRAS family profile. 40 470 IPR005202 -
Gma11g00145 473 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 471 IPR005202 -
Gma11g00145 473 Pfam GRAS domain family 49 470 IPR005202 -
Gma11g00145 473 PANTHER SCARECROW-LIKE PROTEIN 3 5 471 IPR030008 GO:0003700|GO:0005634|GO:0009739
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00145 Gma-Chr11 1145850 1148127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00145 1 473 GRAS Transcription Factor Family AT1G50420 59.714 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g00145 GRAS 2.1e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00145 - - gmx:100819988 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02268 01 57827014 57829252 Gma11g00145 11 1145850 1148127 GST