Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00135 ATGGGGTGCATATGCTCAAAAAGCTCTTCAGACGACAAAGAGAAAGTTGATGAATATGAGAAAGAAAAAGAAAAAGAGTCGTCGAACAAGTCTTCTTCTGTGCAAGTGGTTGCTCCTGCTGTCTCAACTGCACAGTTAGATGGTAGCACGAATGGTTCGGGGCCCCGAATGGCTAAGTCATCATCACAAGTGATTAGAGAGTTTGTCAAAGATAATAAAAGCAACAAGAACCACTTAGATGCTGCCACAAGAAGCCAGCACCAGAGGTGCAACACGATGAGCGGTGGTGTAGGTGAAAGAAAGCCACTAATGAGTAGAATCCTTAGCGTGCAACATTTTGCAGGAGAACAACATGTTGATTCTGGATGGCCATTGTGGTTATCTTCAGTGGCAGCAGAAGCCATCAAAGGGTGGATGCCTCGACGGGCAGACTCTTTTGAAAAATTAGACCAAattggacaaggggcttatagcagtgtgcataaagctcgtgaccttgagactggtaaaattgtggccttgaagaaggttcgcttttcaagtacagaagcagaaagtgtcaaattcatggcaagggaaatctatatattgcgtcaactcgaccatcctaatgtcatcaagcttgagggtattgtcacgtctagaacgtccaccagtttgtaccttgtttttgaatacatggagcatgaccttgctgggctagcaACTATACATGGCTTCAAGTTAACTGAACCACAGataaaatgttatatgcagcaactgcttcgtgggcttgaacactgccatagtcggggtgtgttgcaccgtgacatcaagggttcaaatcttctgattgacaacaacggaaatctcaagattggagattttggtctttcaatagtttgtgatcctgataaaaagcagccattgactagccgtgttgtgactctgtggtatagggcacctgagcttttgctaggtgctacagattatggggctgcaattgacatgtggagtgttggttgcattcttgccgaattgctggtggggaagccaatcatgcctggaagaacagaggtggaacaaatgcacaaaatttttaagctttgtggttcgccatctgaagactattggcagagaacaaaattaccccatgcaacaagttttaagcctcaACACCCTTACAACCGCCAAGTTTCCGAAACATTTAAAAACTTTTCTCCCACGGCATTGGCTCTTGTTGATATGCTCCTTACAATAGAACCAGAAGATCGAGGATCAGCAACTTCTGCACTCGAGAGTCAGTTCTTCACGACAAACCCCTTACCTTGTAATCCCTCAAGTTTACCCAAGTTTTCACCAACCAAGGAGTTTGATTCTAAGCGTCGCGAAAAGGAAGCTACAAGGAAAAATGCGGAATCTATTAAAGGACGTGGACCAGCTTCTGTTTATAGGGGAGCAGCAGATACCAAAGTAATGGGTTCACCAAAGTATATTGCTCGGGGAGATATTTCTATGCGGGGCAAGTCAAATACTAGAATGTCCCATGTTAAACATCAATCGGAAGAGGATGGTGGGTCTAACGACAATGGTGAAGCAACCATGATAAGTCTACACAATGCCTACACACAGATGCAGAGCAGTATGGCAGGACCATCCTCATTGAGGAAGAATTCAGAATTACCGACACATCATGCAGCGGCAGAATTTTCTACCTCTTCCGTTAAAAAGGAACCGGGCATGTCTGTTCGTGAACCTGGGGTGGGTTATATGCCGAAGAAAAATAGGATCCACTGCTCTGGACCATTGGGTGGCAACATTGATGACATGCTTAAAGAGCATGAGCGATTAATGCAAGATGTTTTCCGTAGCGCAGTGGAAATGGAGCAGCGGTTAGCAAACACATGGAGAATGCCTCTTAACGACAAGAAATTCATAGAAACTGCTCTCCTTTCCGACCTCCGACTCGACGGCCGTCGCCCCTCCGACTACCGCAAGCTCACCGTCAAGCTGGCCAAGCAAGACGGCTCCGCGGAGGTTCATTTGGGCCAAACCCACGTTATGACCTTCGTCACCGCCCAACTCGTCCGCCCCTACCGAGACCGCCCCAACGAGGGCTCCCTCTCCATCTTCACCGAGTTCTCTCCCATGGCCGACCCCTCCTTCGACCCCGGCCGCCCCTCCGACGCCGCCGTCGAGCTCGGCCGTGTCGTGGACCGTGGCCTCCGCGAAAGCCGTGCCATCGACACTGAATCGCTCTGCGTCCTCTCCGGCAAACTCGTCTGGGCCATTCGCGTCGATATCCACATACTCGACAATGCCGGAAATCTCGTCGACGCTGCAAATATCGCCGCGTTGGCTTCTCTGTTGACTTTCCGGCGGCCGGAATGCTCGTTGGCCGGAGAAGACGGGCAGGATGTGGTGGTGCATCCTCCCGAGGAGCGCGACCCGATTCCGTTGATTATTCATCATCTTCCCATTGCTGTTACCTTTGGATTTTTCAGCAATGAAAATCTCCTCGTGATAGATCCGACGCACCATGAAGAGTGTGTGATGACAGGCCGCATGACTGCCACGCTTAATTCAAACGGCGACGTTTGTGCAATTCAAAAGCCTGGGGGAGAGAGTGTCTCTCATAGCGTTATCATGCACTGCTTGAAACTTGCTCATGTTAAAGCTACTGATATTACAACTAAGATTAGGGATGCCGTTGAAATACACAACAATGAAAGGGCTTTACGGAAGATTAAACGCCATTCTTCGTCTGTTGCTGTGGATGTATGTGGGGAAAAACAAAATCAATTGGATGCTAGTCATTTGGACAAATTGAAGCTGGAAGAAGAAGAAGAAAGTCCTATGGAATGTGAAGCCTCACCATCAGGACAAGAGCAAAGTAAGGATGGAGTCTCAAAGAATTTCACCGGTGGTCCCTCGAGTTGGGATCCCTACTCAGAGTGTGTCAATTCAGATCTTCTAAAAGCTTCTCTAGCTTCACGCGGACCGTCAGTTCCTAGTAAACAAAAGGATTCAAGACGTGAAACTAAGCCCAAGGAACCACCACTAGAAATTAAGACAGATTCTACACCAATTAACAAGGCTCTAACTGCTGGGCAGAATAACAAAGCTTGTGTTCGTATACCTGTTGCAACGGGGAAGTGA 3138 0.3799 MGCICSKSSSDDKEKVDEYEKEKEKESSNKSSSVQVVAPAVSTAQLDGSTNGSGPRMAKSSSQVIREFVKDNKSNKNHLDAATRSQHQRCNTMSGGVGERKPLMSRILSVQHFAGEQHVDSGWPLWLSSVAAEAIKGWMPRRADSFEKLDQIGQGAYSSVHKARDLETGKIVALKKVRFSSTEAESVKFMAREIYILRQLDHPNVIKLEGIVTSRTSTSLYLVFEYMEHDLAGLATIHGFKLTEPQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDNNGNLKIGDFGLSIVCDPDKKQPLTSRVVTLWYRAPELLLGATDYGAAIDMWSVGCILAELLVGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQRTKLPHATSFKPQHPYNRQVSETFKNFSPTALALVDMLLTIEPEDRGSATSALESQFFTTNPLPCNPSSLPKFSPTKEFDSKRREKEATRKNAESIKGRGPASVYRGAADTKVMGSPKYIARGDISMRGKSNTRMSHVKHQSEEDGGSNDNGEATMISLHNAYTQMQSSMAGPSSLRKNSELPTHHAAAEFSTSSVKKEPGMSVREPGVGYMPKKNRIHCSGPLGGNIDDMLKEHERLMQDVFRSAVEMEQRLANTWRMPLNDKKFIETALLSDLRLDGRRPSDYRKLTVKLAKQDGSAEVHLGQTHVMTFVTAQLVRPYRDRPNEGSLSIFTEFSPMADPSFDPGRPSDAAVELGRVVDRGLRESRAIDTESLCVLSGKLVWAIRVDIHILDNAGNLVDAANIAALASLLTFRRPECSLAGEDGQDVVVHPPEERDPIPLIIHHLPIAVTFGFFSNENLLVIDPTHHEECVMTGRMTATLNSNGDVCAIQKPGGESVSHSVIMHCLKLAHVKATDITTKIRDAVEIHNNERALRKIKRHSSSVAVDVCGEKQNQLDASHLDKLKLEEEEESPMECEASPSGQEQSKDGVSKNFTGGPSSWDPYSECVNSDLLKASLASRGPSVPSKQKDSRRETKPKEPPLEIKTDSTPINKALTAGQNNKACVRIPVATGK 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00135 1045 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Gma11g00135 1045 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 74 596 - -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 988 1031 - -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 436 475 - -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 69 83 - -
Gma11g00135 1045 CDD RNase_PH_RRP45 631 890 IPR033100 GO:0000178|GO:0006396
Gma11g00135 1045 MobiDBLite consensus disorder prediction 448 466 - -
Gma11g00135 1045 PANTHER CELL DIVISION PROTEIN KINASE 74 596 - -
Gma11g00135 1045 Pfam 3' exoribonuclease family, domain 2 817 883 IPR015847 -
Gma11g00135 1045 Pfam 3' exoribonuclease family, domain 1 664 788 IPR001247 -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 494 526 - -
Gma11g00135 1045 Gene3D - 626 917 IPR027408 -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 938 973 - -
Gma11g00135 1045 Gene3D Transferase(Phosphotransferase) domain 1 229 470 - -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 542 582 - -
Gma11g00135 1045 Coils Coil 604 624 - -
Gma11g00135 1045 ProSiteProfiles Protein kinase domain profile. 146 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00135 1045 CDD STKc_CDK9_like 146 430 - -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 8 29 - -
Gma11g00135 1045 SUPERFAMILY Ribonuclease PH domain 2-like 813 914 IPR036345 -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 542 571 - -
Gma11g00135 1045 Pfam Protein kinase domain 146 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00135 1045 MobiDBLite consensus disorder prediction 998 1015 - -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 1 98 - -
Gma11g00135 1045 SUPERFAMILY Ribosomal protein S5 domain 2-like 631 843 IPR020568 -
Gma11g00135 1045 SUPERFAMILY Protein kinase-like (PK-like) 139 437 IPR011009 -
Gma11g00135 1045 SMART serkin_6 146 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00135 1045 Coils Coil 9 29 - -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 950 973 - -
Gma11g00135 1045 MobiDBLite consensus disorder prediction 30 68 - -
Gma11g00135 1045 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Gma11g00135 1045 Gene3D Phosphorylase Kinase; domain 1 133 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00135 Gma-Chr11 1053121 1061014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00135 138 469 Core Cell Cycle Gene Families AT5G10270 52.299 6.11e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gma11g00135 Pkinase 5.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00135 K08819 - gmx:100817858 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02279 01 57937264 57941085 Gma11g00135 11 1053121 1061014 GST