LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g00094	ATGGATCCTTTTGATGATATTCTACCAACGGCTCCTGCTGCACGTACTCGGCTGGGTGCCAAGTTTATTCCAAAGGCCAAATCGAAACAGTTTCCTCGAAAGGGAATACCAGCATCAGAACATTCCACCTCATCTAAAGATGGAATTTTGGGAAATGAATGTCAAAATGCAGTTGCTTCAGCTTTAAGTATGCCAGCGGAAGAACCTAAGGGGTCCGTTCATCATACACAGGTAGAAATTCCAAATTCAGAGGATTCCACAAATCGTAAACAAGTTAGTGTGAAAGGAGATAGTGCAGCCTTGGTAGATGATTCCACAATCACCGCAACTGAAGTTGATGCTGATCAGAAATCTATGAACTTTTTAAAACCAATATGTGAGGTTACTGAGGGAGATCCAGTATATTTTGAGGGGGCCTCAGTCACTAGCTTCGTTCCTGAGACTAACCTCAATAATGGCACAACACAACCAGTTCACCCTGCTAATGCTGTAGAAAATGAATTTAATGTGGCTGCTCCATCTGCAACATGCTCAGCCATAGATAGGATGAAAGAACAACCTAAAATTGGGGAAGGTTCATTTCTTGATAGCAACAAGCTTATTGACAATTCAATCCAAGTTGGCACGGATTTGGGCTTCCAAGGTTCTTCAGATGATAAGATTGCAATAATTCAGAGCAACTTTGATTCAAAGTCAAACTTTGGAAAAAAACAAGAGGGAGTATCTGCAGAATTTGAATTGGATCCTTTCAGCAACATACTCCCTTATCCTGGTGCTGGGAATGTTCATAAATTTAAACCCAAGATTAAGCCACGACCTAGAGTTAGCAATGTGCCAGCAATTGCTTCTGATTCATCTAATGTTATGATGGAAAAATCTGTTGAATTGCCTACATCTTGCACAAACGACTTTCAATTTTTTCAGTCTTGTGGTGATGGCAGTGGTGGACTAAACCAATCAGCCAGTTTACCTTTGCCAACATCAGAGATTCTTAGGACAACTGAATTACCTGATAAGTTTGATGATACTAGCTCAAGTATTCTCTCTGAAGACAATAAGAGCTTGGCAGCTGCAATTCCTTCCCAACTGGATTCCCTAAATGCCATGCTTTCAGAGGATGCAGTTCATAATGGAACTACAGATTGGCCTTCTAGCTTTGGTAAATCATCCAGAGAGGCTGCAGACATTTTTTCTGGGCTGGAATCCCTTGATGATTTTCTCACCCAGGCTGCCACTGGTACAGGAAAACCAGCCCTTCATTCTTTTAATGGGAAGGGTGGAGAGGAAAATTTTGTCACACCTGCTTCTAGTTCCATTAACTCTTTTGGGGAATGTGATACTACCCAAGTTCAAAGGTGTCCCGAGTATCATACTCCTCAAGATTCATTAACCTTCAATGAAGCTGCAGTCTTCAATGAGGATGATATTCACACTAGCAATAGGAGGTTGGAAACAGAGGAAATTGTGGACTTGAATCCTGCCTGCCCAGGTGATGATGTGATTGATTATCAATCCATGAAATCTGGCGAAGATCCAACTTTGGGAATTCCAGTGCATGAAGAGTTGACAAATGCTGCAGATAGTCCCACATTGGTTGATTTTTTGCATGCAGATGTTACAAGGGAAAAAGAAGATTCCAATAAGAGAAAAAAGGATGGCTCAACATCATGTTCTCTAAGGAAGAACAGAAGATGTATTGCTGGTGAGGAGGATAAAGGTGCTAAAACCTCAAGGCAGCTGAGAAAACAAGCAGCTCGTAAACCTGTAAACAGTTCACTCAATGAGGATGTTGAAGATAATAATGACCTTGACCCTTCTTATAATTCTAATGGAGATGAACTTCAAGAAAATGATGACGAGTATGAAGTTGATTATCCATCCAGGAAGAGAAGAGTATCAAATAGTTCACAGAAGAAACCTGTGGCTAAAAGTGGAAAAACATCTCAAAAGCCTAAGAAGGCTAATGATGATTTAGAAAAAACTGAGGAACCTCCCAAAAAGTTCTCTCATTCAACCCGACGAAGAAAAAGATGCGTGGACAAGGCTCTGCTGGAAATTCCTGAGGATGAACTTGATCGTCTAAATATACCTATTAAGGATATTATTTTACTTGAAGAACATAGGGAGCGGCTGGCGAAAAAAGAGGCGATGACTTCAAATACTTCTTCCACCAACCAAAGTGGTGGAGATTCTCTTCATGAGGCTGGTTcttataatgaaggggcttatgatgatggagcttatgatgatggggcttataatgatgaggagTTCTTAGGTTCAGAAGATGGTAGAGACCCATATGATAATCAGGCCAATGAAGGGATAACATCAACTTCCGTTTTACTCAATTACCAGTCTTTCAGGGAAAAGAAGACACCTAGGGGAAAATGGTCAAAACAAGAAACTGAACTGTTTTATGAGGCTGTTAGGGAGATGGGAACAGATTTTTCTGTGATACAAAAGACTTTTTTCCCTGATAAAACACGGCATCAAATTAAGTTGAAGTACAAGAAGGAAGAGCGGCAGCAGCCTTTACAGCTAACCGATGCTGTAAATAACAGTGCAAAAGATCACCCTCATTCTAAGTTGTTTATTGAACTACTAAAACTAGCTTCCACCAAGGCAGAAGAATACCCCGGTAGAGATGCCTCAGATTTGGTGATGGCGGAGGAGGTTGTGGACCTAACCGCTGGAACTCATGAAGAGGTTCCGAAGGCTGCAACAAAAAAGGAGGATGCCGATGTTAAAGCACAGGAAGATTCTGTGGCAGTTCCTAGTCCAGAGCAATCTGATGACAGTGACGATGACTTTCAAAAATGGTCTCAGTATAAATGTGGCTATTAG	2847	0.4025	MDPFDDILPTAPAARTRLGAKFIPKAKSKQFPRKGIPASEHSTSSKDGILGNECQNAVASALSMPAEEPKGSVHHTQVEIPNSEDSTNRKQVSVKGDSAALVDDSTITATEVDADQKSMNFLKPICEVTEGDPVYFEGASVTSFVPETNLNNGTTQPVHPANAVENEFNVAAPSATCSAIDRMKEQPKIGEGSFLDSNKLIDNSIQVGTDLGFQGSSDDKIAIIQSNFDSKSNFGKKQEGVSAEFELDPFSNILPYPGAGNVHKFKPKIKPRPRVSNVPAIASDSSNVMMEKSVELPTSCTNDFQFFQSCGDGSGGLNQSASLPLPTSEILRTTELPDKFDDTSSSILSEDNKSLAAAIPSQLDSLNAMLSEDAVHNGTTDWPSSFGKSSREAADIFSGLESLDDFLTQAATGTGKPALHSFNGKGGEENFVTPASSSINSFGECDTTQVQRCPEYHTPQDSLTFNEAAVFNEDDIHTSNRRLETEEIVDLNPACPGDDVIDYQSMKSGEDPTLGIPVHEELTNAADSPTLVDFLHADVTREKEDSNKRKKDGSTSCSLRKNRRCIAGEEDKGAKTSRQLRKQAARKPVNSSLNEDVEDNNDLDPSYNSNGDELQENDDEYEVDYPSRKRRVSNSSQKKPVAKSGKTSQKPKKANDDLEKTEEPPKKFSHSTRRRKRCVDKALLEIPEDELDRLNIPIKDIILLEEHRERLAKKEAMTSNTSSTNQSGGDSLHEAGSYNEGAYDDGAYDDGAYNDEEFLGSEDGRDPYDNQANEGITSTSVLLNYQSFREKKTPRGKWSKQETELFYEAVREMGTDFSVIQKTFFPDKTRHQIKLKYKKEERQQPLQLTDAVNNSAKDHPHSKLFIELLKLASTKAEEYPGRDASDLVMAEEVVDLTAGTHEEVPKAATKKEDADVKAQEDSVAVPSPEQSDDSDDDFQKWSQYKCGY	948

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma11g00094	948	SUPERFAMILY	Homeodomain-like	796	844	IPR009057	-
	Gma11g00094	948	SMART	sant	794	843	IPR001005	-
	Gma11g00094	948	PANTHER	RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B	264	939	-	-
	Gma11g00094	948	MobiDBLite	consensus disorder prediction	37	52	-	-
	Gma11g00094	948	ProSiteProfiles	Myb-like domain profile.	790	841	IPR001005	-
	Gma11g00094	948	MobiDBLite	consensus disorder prediction	66	91	-	-
	Gma11g00094	948	MobiDBLite	consensus disorder prediction	898	948	-	-
	Gma11g00094	948	MobiDBLite	consensus disorder prediction	19	52	-	-
	Gma11g00094	948	MobiDBLite	consensus disorder prediction	713	773	-	-
	Gma11g00094	948	CDD	SANT	797	839	IPR001005	-
	Gma11g00094	948	PANTHER	TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG	264	939	-	-
	Gma11g00094	948	MobiDBLite	consensus disorder prediction	76	91	-	-
	Gma11g00094	948	Pfam	Myb DNA-binding like	788	858	IPR039467	-
	Gma11g00094	948	MobiDBLite	consensus disorder prediction	898	919	-	-
	Gma11g00094	948	Gene3D	-	798	863	-	-
	Gma11g00094	948	MobiDBLite	consensus disorder prediction	568	674	-	-
	Gma11g00094	948	MobiDBLite	consensus disorder prediction	716	733	-	-
	Gma11g00094	948	MobiDBLite	consensus disorder prediction	649	669	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g00094	Gma-Chr11	772898	781842	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB-related	Gma11g00094		Myb_DNA-bind_7	4.6e-22	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g00094	K15198		-	gmx:100809837	1769.21