Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00091 ATGAAGAAGAAGCGTGGGTGGATTTGCTCCCAGTCGTTCTTTTCGTTCCATGCCAGTTGCTGCTTTCACTTGTCTCCAATTGGTTTAGCATTTTCTACGACAGAGGAGGAATTAGCCAAAGCTTTTTCTCAATATGGCAGTGTTCTGAACGCTAATATAATACTGAATAAAACCAAGAATAGATCCAAAGGTTTTGGATATGCCACTTCTGCTAAAGAGGAAGAAGCATGCAAGGCACAGATTGGCATGAACGGAAAGATATTACATGGACGAGTTATATATGTAGACGTGTAA 294 0.4048 MKKKRGWICSQSFFSFHASCCFHLSPIGLAFSTTEEELAKAFSQYGSVLNANIILNKTKNRSKGFGYATSAKEEEACKAQIGMNGKILHGRVIYVDV 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00091 97 PANTHER RNA RECOGNITION MOTIF 1 96 - -
Gma11g00091 97 SMART rrm1_1 21 96 IPR000504 GO:0003723
Gma11g00091 97 Gene3D - 27 97 IPR012677 -
Gma11g00091 97 SUPERFAMILY RNA-binding domain, RBD 28 96 IPR035979 GO:0003676
Gma11g00091 97 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 97 IPR000504 GO:0003723
Gma11g00091 97 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 28 93 IPR000504 GO:0003723
Gma11g00091 97 PANTHER TRANSFORMER-2-RELATED 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00091 Gma-Chr11 749326 751576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00091 32 97 Eukaryotic Initiation Factors Gene Family AT2G36660 37.879 2.52e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00091 - K13195 gmx:102661087 168.318