Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00086 ATGGAGGGAGCATCGAGGAATGGTAGTGTTTGTGTGGCACCGTTTCTGAGCAAGACATACGACATGGTCGATGATCCTTCCACCGACTCGGTGGTGTCGTGGGGCAAAAACAACAACACCTTCGTTGTTTGGAACGTTCCCCAATTCACCACAGACATCTTGCCCAAACATTTTAAGCACAACAACTTCTCCAGCTTCGTCAGACAGTTGAATACTTATGGTTTCAGAAAGGTTGACCCAGATCGATGGGAATTTGCAAATGAAGGATTTTTAAGAGGTGAAAAACAACTTTTAAAAAGTATCAGTAGGCGGAAATCTGCTCATGTAAATGGTAGTCAACAACCATCTCAAGTGCATAAATCAGCTGTTAGAGCATGTGTTGAAGTGGGGAAATTTGGGTTTGAGGAAGAGGTGGAAAGACTGAAAAGGGATAAGAATGTTCTTATGCAGGAACTTGTTAGGTTGAGACAGAAACAGCAAGGGACTGATAACCAATTGAAAAATGTTGGGCAACGTGTGCAGTCAATGGAGCAGCGTCAGCAGCAAATGATGTCATTCCTGGCAAAGGCTATGCAGAGCCCATGCTTCATAGCTCAATTTGTTCAGCAGCAGAATGAAAGTAGTAAACATATCCCTGGGAGCAATAAAAAGAGGAGGCTCCAGCGACAAGAAGAAGATAGTTTAGCCACCAAGGATCTCCATAGTTCTCTTGAAGGACACACTGTCAAGTATCAGAGTTCCATAAATGAGGCTGCAAAAGCATTATTTCTCCAGATATTGCAAATAAACAATTCTACAACACAATCATCAATTAAGAGCCCTGATGTTTTCCTTATTGATGATGTTCCTTCTGCCATTGCATCAGATAGCAGTAGTTCATCCACTCAGGTTTCTAATGTGATGGTTCCACCTATATCTGAGCTGACATCTATGGAAGTAGGATCACAGTTTCCTCTCAATTGTATGCCCAGTAACATATCTGAGTTGCAGTCTTCGCCTGCTGTTTTGGGTTTCTGTAGAAATCAAGGGATGGAGACAGAAAGCAGTTTATTGAATCATGATCTGAATGTTATGGGGGCTGATACTAGGAACATGGGGGAGATAGATATGATGGTTTGCCTTCAGAAATGGAAAATAAGCAGGAAAATTTTGATAAGATACTACATGTTGACCATCTTACTCAACAGATGGGACTACATGCATTGGATTACTAATTGTGTGTATATATGTTACTCGCAACTGAAGGTTGAGAGAAATGCTAGCAGAAAAAAATCATTGAACTGTTGTCTAGAGTCAAAGGCTCTTCTCTTCTGGCGCAAGGACACCTGCCACCACAAGCTCTCCGCTGCCCACCGCCCGCCGCCTCTGCCTTGGCGTGTTCAGCCGCCATCGCCGTCCCTGCCCACTGCTTCTGCTGGAAAGCAGCAACTAAGCTCTCCACCGCCCTTAGTCTTGTTCTTTTTTGAAAATAATTTTGTTGTTATGGACTTTGACGACTTAGAAGAAGCGCCGATAAAGGCCACGTCTCGAGTCTCCAAGTTCGCGCCAAAATCATCAAAGCTCAAACCTAAACCAAAATCAGAACCTGCCCCCCCCAAACCTGAACCCCAACCACCCATCTCCAAACCAGAGCCTCAGGAATTCGTTGCAGCAACTGTCAAAAAGAATGAAGATGATGGCGTCGAAACAGTGCCACCAACTCATACGAAACCCGAACTCGACGCCACTGTCAAAATGGAGGAGGCCGAAGACGAACCAGAATCAGTTCGAGACGATCCCATAGACGAAGATATCCCTGAAGAAGACACAGTTGTGCGCGAAATTGATGTCTTCTTCTCTCCTTCTGTCGATGCCCAGACTCAGCTATACGTCTTTCAGTATCCCTTGAGACCTTCTTGGCGACCGTACGATTTGGATGAACAATGCGAAGAGGTAAGGTTGAAGACTAAAACTTCAGAAGTGGAGATTGATTTATCCATTGATCTTGACTCGGACCATATTGACAAAGAGTTTGCCACCAAATACAACATCACAAAGCAGACTTTATCAACTACGTGGAAGCCATCTCATGCAAATGGATGTGCTGTTGGGCTTCTTATGGGTGATAAGTTACACCTGCATCCAGTTCATGCAGTTGTGCAGCTCCGACCAACATTACAACATCTTAATTCTGGTGGTTCAAAACGGAAGAACGCTGCCTCCACTGGAGCAAATGCTACTGTCAAAATTGAGGGCTCAAATGAAGAGAAGTCTGTTGCTACATCAAAGAAGCAGAATAAGCAGACAGGACCTTCTATTATTGAGCAAAAGAGTGATGGTGATGAGTGCTGGGTTCCTCTAAAGTACCATAGCTGCAAGAGTGATATATCCTCTAGATATTTGCAGCAAATGGTGACACAAGAAAGTTCTCCTATAAACTTCACAATGAGAGCGTATGATTATGTTACTGCACTGTGTCCTGGTGGGAGCAGCAACAATTTACCAAAAGGTCTTTCTAAAAGGTATCTTCTATCATTGCCCGTGGAAGAGCGTCTTAAGAAAATGCTTGAGGATCGTCCACTTCATCGTTTCAGTGCTATTAAGCACTTTGCTCCAGAATATTCCGAGAATGAACTTCTAGGATTCCTGCAGCAGCATGCAATATTGGTGTGGGGACTATGGACTGCAAAAAGTTCATTGCTATATCCTGATGGTGGTGTGGAAACTTTGGCCAGAGATTATTCCCTACTATTGTTTAGCAAGAGTTTGAAAGTTCAGTTTTCTGATGTGAGTATTCGAGGAGGTGAACTTGTTAATCGTGTGAGAAACTGCCTGAAGATATTTGGCGTGGAAAGAAATGATCTTGATAAATCTACTGGAAAACCAAATCCTTACTGGAAGTTCAGAGAGCTTCCTGACGAGTCATTCAAAAAACTCTATCCAGATATTGTTGAAAAACAGGAAGAACTTTTCAAAGGTTTGGAAAAACAGTTATCTGGTTTTTCTTCGAATGTTGGAAAACGTAAAATTGGTAAAAATGCTGTAGCAAACCAAGGTGTGAACACTGAGGTTCATAAATCAGAAAGTTCAGATCAACGGGTAACAAGTCTGGGCAGAGTGCCTCCTGCGAAAATGACCATGTCAAATGAAACCCGACATGCTCTGCCAATTGCCCTGAAGAAACTTTTTCAGACTCACAAAGTTTGCAGCTTCAAATTGATATGCGAAGGATTGCGCGAAATGGCAGTTTCCAAAGCTATGCTTTCAAAGGGAGATTCTAAAATGGCTGTGGATGCAGCTCACAGTCTTGATGGTCCCCATAATGAGTTGATGGCTGTCATAAGTGAAGTTGCATGCGAAATCAATGGTTCTTATGTGCTGAAGTCATCACCCGATGATCCATTCAGGTTGGATGTTGTAATTGATATGCTTTGTGGAAGTGGACCCAATGCCAAGCTGAAGAAGGCTGAGATACTTGAAGCTGCCAGAAGAAAACTCGGTAGGGAGGTCGCTAGCAATGAATATACCAAGGTCATGAGCGAGTTATGTGTGTCAAAAGGTTCTGTTTGGGTCTTGAAAAGCGGTGATGGAAGTAAGTAA 3579 0.4317 MEGASRNGSVCVAPFLSKTYDMVDDPSTDSVVSWGKNNNTFVVWNVPQFTTDILPKHFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGEKQLLKSISRRKSAHVNGSQQPSQVHKSAVRACVEVGKFGFEEEVERLKRDKNVLMQELVRLRQKQQGTDNQLKNVGQRVQSMEQRQQQMMSFLAKAMQSPCFIAQFVQQQNESSKHIPGSNKKRRLQRQEEDSLATKDLHSSLEGHTVKYQSSINEAAKALFLQILQINNSTTQSSIKSPDVFLIDDVPSAIASDSSSSSTQVSNVMVPPISELTSMEVGSQFPLNCMPSNISELQSSPAVLGFCRNQGMETESSLLNHDLNVMGADTRNMGEIDMMVCLQKWKISRKILIRYYMLTILLNRWDYMHWITNCVYICYSQLKVERNASRKKSLNCCLESKALLFWRKDTCHHKLSAAHRPPPLPWRVQPPSPSLPTASAGKQQLSSPPPLVLFFFENNFVVMDFDDLEEAPIKATSRVSKFAPKSSKLKPKPKSEPAPPKPEPQPPISKPEPQEFVAATVKKNEDDGVETVPPTHTKPELDATVKMEEAEDEPESVRDDPIDEDIPEEDTVVREIDVFFSPSVDAQTQLYVFQYPLRPSWRPYDLDEQCEEVRLKTKTSEVEIDLSIDLDSDHIDKEFATKYNITKQTLSTTWKPSHANGCAVGLLMGDKLHLHPVHAVVQLRPTLQHLNSGGSKRKNAASTGANATVKIEGSNEEKSVATSKKQNKQTGPSIIEQKSDGDECWVPLKYHSCKSDISSRYLQQMVTQESSPINFTMRAYDYVTALCPGGSSNNLPKGLSKRYLLSLPVEERLKKMLEDRPLHRFSAIKHFAPEYSENELLGFLQQHAILVWGLWTAKSSLLYPDGGVETLARDYSLLLFSKSLKVQFSDVSIRGGELVNRVRNCLKIFGVERNDLDKSTGKPNPYWKFRELPDESFKKLYPDIVEKQEELFKGLEKQLSGFSSNVGKRKIGKNAVANQGVNTEVHKSESSDQRVTSLGRVPPAKMTMSNETRHALPIALKKLFQTHKVCSFKLICEGLREMAVSKAMLSKGDSKMAVDAAHSLDGPHNELMAVISEVACEINGSYVLKSSPDDPFRLDVVIDMLCGSGPNAKLKKAEILEAARRKLGREVASNEYTKVMSELCVSKGSVWVLKSGDGSK 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00086 1192 SUPERFAMILY "Winged helix" DNA-binding domain 12 104 IPR036390 -
Gma11g00086 1192 MobiDBLite consensus disorder prediction 509 544 - -
Gma11g00086 1192 Pfam RPC5 protein 600 992 IPR006886 GO:0005634|GO:0006351
Gma11g00086 1192 SMART hsfneu3 11 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma11g00086 1192 MobiDBLite consensus disorder prediction 206 234 - -
Gma11g00086 1192 Gene3D - 9 105 IPR036388 -
Gma11g00086 1192 Coils Coil 131 158 - -
Gma11g00086 1192 MobiDBLite consensus disorder prediction 722 768 - -
Gma11g00086 1192 Pfam HSF-type DNA-binding 15 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma11g00086 1192 MobiDBLite consensus disorder prediction 454 476 - -
Gma11g00086 1192 PRINTS Heat shock factor (HSF) domain signature 53 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma11g00086 1192 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma11g00086 1192 PRINTS Heat shock factor (HSF) domain signature 15 38 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma11g00086 1192 ProSitePatterns HSF-type DNA-binding domain signature. 54 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma11g00086 1192 MobiDBLite consensus disorder prediction 211 234 - -
Gma11g00086 1192 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 342 IPR027725 -
Gma11g00086 1192 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE 9 342 - -
Gma11g00086 1192 MobiDBLite consensus disorder prediction 722 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00086 Gma-Chr11 698895 716364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00086 11 318 HSF AT5G16820 62.581 7.90e-116 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gma11g00086 Sin_N 2.1e-94 CL0662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00086 K14721 - gmx:100780965 1308.51