Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00073 ATGAGTAAGTggcctttcacaatatctcagtggcaggaactggaacatcaagctttaatttacaaatacatggtggctggtcttcctgtgcctcctgatctagtcattcccattcagaacagcTTCCACTCCATTTCCCAAACCTTCTTGCACCATCCCTCTACCACCATGAGTTATTGTTCCTTCTATGGGAAGAAGGTGgacccggagccaggacgatgcaggaggactgatgggaaaaagtggaggtgctccaaggaagcctacccagactccaagtactgtgagcgacacatgcaccgtggccgcaaccgttcaagaaagcctgtggaaTCACAAACTATGACACAGTCATCATCCAATGTGTCATCATTGACTGTAACTGCTGGCAGCAGCACCAGTGCAACTGGAAATTTCCAGAACCTTTCCACCACAAATGCATATGGTAATCCCCAAGGGACTGCTTCTGGAACAGACCAAACCCACTATCACATGGATTCCATTCCCTATGGGATCCCAAGTAAAGAATACAGGTATTTTCAAGGATCTAAATCTGAGGAACATAGTTTCTTGTCCAAAACTTTAGGAAGCAACAGGGTTCTACACATGGAGCCACAGATGGACAACACTTTGATGCCAACCGGTGGAGTTGCCTCATTCTCTACATTGAGATCAAATAATAATTCCATGTTGCAGGGTGATTATCTGCAGCCTTCTTTCTTATCTAGTGAATATGCCTCGGCAGAAACTGTGAAGCAAGAGGGTCAGTCCCTTCGACCGTTCTTTGATGAATGGCCTAAAAGCAGGGACTCATGGTCTGGTCTGGAAGATGAGAGATCCAATCACACTCAACTCTCAATATCCATTCCTATGTCATCGTCAAATTTCTCTGCAACTAGCTCTCATTCCCCACATGACAACTAA 924 0.3214 MSKWPFTISQWQELEHQALIYKYMVAGLPVPPDLVIPIQNSFHSISQTFLHHPSTTMSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMTQSSSNVSSLTVTAGSSTSATGNFQNLSTTNAYGNPQGTASGTDQTHYHMDSIPYGIPSKEYRYFQGSKSEEHSFLSKTLGSNRVLHMEPQMDNTLMPTGGVASFSTLRSNNNSMLQGDYLQPSFLSSEYASAETVKQEGQSLRPFFDEWPKSRDSWSGLEDERSNHTQLSISIPMSSSNFSATSSHSPHDN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00073 307 PANTHER - 2 300 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gma11g00073 307 MobiDBLite consensus disorder prediction 265 307 - -
Gma11g00073 307 Pfam QLQ 5 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma11g00073 307 PANTHER GROWTH-REGULATING FACTOR 5 2 300 - -
Gma11g00073 307 ProSiteProfiles QLQ domain profile. 5 40 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma11g00073 307 SMART QLQ_2 4 40 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma11g00073 307 MobiDBLite consensus disorder prediction 278 307 - -
Gma11g00073 307 MobiDBLite consensus disorder prediction 97 167 - -
Gma11g00073 307 MobiDBLite consensus disorder prediction 109 163 - -
Gma11g00073 307 Pfam WRC 69 111 IPR014977 -
Gma11g00073 307 ProSiteProfiles WRC domain profile. 68 112 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00073 Gma-Chr11 587567 590999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00073 1 111 GRF Transcription Factor Family AT3G13960 61.062 1.51e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gma11g00073 WRC 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00073 - - gmx:100817313 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02344 01 58400145 58405214 Gma11g00073 11 587567 590999 GST