Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00037 ATGGGTCCGATGCTACAAACCATTCTCACTGTGCTTCTTCTCCTTATGCTTCTTCTCATCGTCATCTTCCTCTTCTTTCTCTTCAAACCATGGCGCTTCTTTTTCTCTCCGCGTTTCCTCTCCTCCATCAAGGGCGAGCTAGAGCGGCCCCTTTTTGTGGGGGACGAAGGTGATGCGTCGTCGTTTAATCAGTGCAATGAATTGCCTCGAGATTATGATCTCGAGGGTGCGTGTTATCCCAGTGAAGTTCATTTTCGCTCTCCTCGAACCCATGGCCAAGGCCTTGTTCATAAGCAAAGGCTTCAAACCCTTAACATGCCACAGCCACATGCTGGTGATACTTTGGTTGTCGATGTCATCTCTGATCATTCCTCTGAGGATCTTGATGTTGGTCAAACGCTTAAGCTTCCTTCATCTCATTTAGCTCAAATTCAAAAGCATGCCCCGCCCAATTTTCAAAATGATAGACTTGAGGACTTTGTGCAAAGGGATATCTCTGATCAAAGAAGTTGCCTCACTCTGGAGGTTATCAGTGGCCCTTCTCGGGGACTTCGTTATTCTGTTGAGTCCACCAACCCCTCTCGTCTCCCGCTAACCTTGGGAAGGGTTTCTCCGAGTGATTTGTTGATGAAGGATTCGGAAGTGTCAGGAAAGCATGCCATGATAAACTGGAATTTGGATAAAATGAAATGGGAGTTGGTGGATATGGGTAGCCTCAATGGAACACTGTTGAATTCTAAGCCAATCAACCATCAAGACACTGGAAGTAGGAATTGGGGGAATCCGATGAATCTTACTAATGGAGATATCATAACACTTGGAACAACATCAAAAGTAATGGTTCATATTACCTCACAAACTCAGCATCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCGATGGCTATGCGTCGAGGAGGAAAAAAGTTTACTATGGAAGACGTTTGCTATTATCAATGGCCTCTACCTGGGCTGGATCAGTTTGGAATTTTTGGCATTTGTGATGGGCATGGTGGAGATGGGGCTGCCAAATCTGCTAGCAAACTTTTTCCTGAGGTAATTGCTAGTATATTATCGGATTCATTAAAAAGGGAGAGGGTTTTATCACTCTGTGATGCTTCAGATGTTCTTCGAGAAGCATTTTCTCAAACAGAAGCACACATGAATAACTATTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGACTGATGGTGATGAAAATTTCTTTGCACAATGTGCTAATGTTGGAGACTCCACCTGTATTATGAGTGTGAATGGGAAACAAATCAAGATGTCAGAAGATCACAAGTTAACGAATTATTCTGAAAGACTCAGAATCGAAGAGACAGGTGAACCACTAAAAGATGAGGAAACACGTCTATATGGTATAAATCTGGCAAGAATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCCCGGTTCAGTTCAGAACCTTACATTAGTCAAGTTGTGCATATTGATCAAGCGAGCAACGCTTTTGCTATTCTAGCTAGTGATGGGTTATGGGATGTCATcagcgtgaagaaggcaattcagcttgtgttgcagATGAGGGAGAGATGCTATTCAGAGAATACAGCAGAAAAGACTGCTAGTTTGTTGTTGAATGAGGCTAAAACACTCAGAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATACCTTAAACAGATTCTCTTGTAAAGTTGAATCCTAG 1731 0.4194 MGPMLQTILTVLLLLMLLLIVIFLFFLFKPWRFFFSPRFLSSIKGELERPLFVGDEGDASSFNQCNELPRDYDLEGACYPSEVHFRSPRTHGQGLVHKQRLQTLNMPQPHAGDTLVVDVISDHSSEDLDVGQTLKLPSSHLAQIQKHAPPNFQNDRLEDFVQRDISDQRSCLTLEVISGPSRGLRYSVESTNPSRLPLTLGRVSPSDLLMKDSEVSGKHAMINWNLDKMKWELVDMGSLNGTLLNSKPINHQDTGSRNWGNPMNLTNGDIITLGTTSKVMVHITSQTQHHIPFGVGMASDPMAMRRGGKKFTMEDVCYYQWPLPGLDQFGIFGICDGHGGDGAAKSASKLFPEVIASILSDSLKRERVLSLCDASDVLREAFSQTEAHMNNYYEGCTATVLLVWTDGDENFFAQCANVGDSTCIMSVNGKQIKMSEDHKLTNYSERLRIEETGEPLKDEETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASNAFAILASDGLWDVISVKKAIQLVLQMRERCYSENTAEKTASLLLNEAKTLRTKDNTSVIFLDFDTLNRFSCKVES 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00037 576 ProSitePatterns PPM-type phosphatase domain signature. 331 339 IPR000222 GO:0043169
Gma11g00037 576 Gene3D - 166 301 - -
Gma11g00037 576 CDD FHA 172 280 IPR000253 GO:0005515
Gma11g00037 576 PANTHER PROTEIN PHOSPHATASE 2C 37 575 IPR015655 GO:0004722|GO:0006470
Gma11g00037 576 CDD PP2Cc 302 564 IPR001932 -
Gma11g00037 576 Pfam Protein phosphatase 2C 302 557 IPR001932 -
Gma11g00037 576 Pfam FHA domain 199 274 IPR000253 GO:0005515
Gma11g00037 576 SUPERFAMILY PP2C-like 307 566 IPR036457 -
Gma11g00037 576 SUPERFAMILY SMAD/FHA domain 170 281 IPR008984 GO:0005515
Gma11g00037 576 ProSiteProfiles PPM-type phosphatase domain profile. 294 564 IPR001932 -
Gma11g00037 576 Gene3D - 302 572 IPR036457 -
Gma11g00037 576 SMART PP2C_4 288 562 IPR001932 -
Gma11g00037 576 ProSiteProfiles Forkhead-associated (FHA) domain profile. 198 249 IPR000253 GO:0005515
Gma11g00037 576 PANTHER PROTEIN PHOSPHATASE 2C 70 37 575 - -
Gma11g00037 576 SMART FHA_2 197 249 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00037 Gma-Chr11 299312 304240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00037 26 566 PP2C-type Phosphatase Gene Family AT5G19280 57.193 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00037 K01090 - gmx:100170642 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02397 01 58720691 58726576 Gma11g00037 11 299312 304240 GST