Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00033 ATGTACAACGCCGAGAAGCGCGGGAAGCGCCAGGTCATGATTAGGCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCGCTTTGATGTTGGTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTACTACCCTCAAGACAGTTTGGGTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGAAGCAATTCCGGATGTGCAGAAAGAACACCCCAGCGATGTTCGATGGTTGGTGTTTTGCCTTATCAGCGGACTGACAAATCAAGATGAGATCATTGACTGCACAAACGTTCTAAAAGCAGATCCTGAAATCCTGCGTTGA 462 0.4654 MYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNEAIPDVQKEHPSDVRWLVFCLISGLTNQDEIIDCTNVLKADPEILR 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00033 153 Pfam Ribosomal protein S8 2 107 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gma11g00033 153 PANTHER 40S RIBOSOMAL PROTEIN S15A-1-RELATED 1 107 - -
Gma11g00033 153 Gene3D - 1 56 - -
Gma11g00033 153 ProSitePatterns Ribosomal protein S8 signature. 87 104 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gma11g00033 153 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 107 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gma11g00033 153 Gene3D - 57 109 - -
Gma11g00033 153 SUPERFAMILY Ribosomal protein S8 2 107 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00033 Gma-Chr11 268761 271621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00033 1 107 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 98.131 4.47e-76 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00033 K02957 - gmx:100799973 218.009