Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00025 ATGGTTTCAAAACCCTTTCAATTGCTCCTTCTTTGCACTTTTGCTTTATTTTCAGGCGTTGTATTTGCCGATCCTCCGTATTATATTTGTTCCACAAGCAGCAGTTTTGCAAAAGGCAGTTCTTTTGAAAACAATCTAACGAACCTCCTTTCCTCTTTATCCTCCATTGCTTCAAACTACAAATTCTATAATACTTCTTCGTATGGGATTGGCCCAGATAGAGTTTATGGCCTCTACATGTGCCTCGACTATATTACAAACGAATCATGCAAGACATGCATCACTACAGCAACAGAGGACATTGTCAAACTCTGTCCTCGAGCCACAGAAGCAGTTGTTTGGGAGGAGTTGTGTCAATTACGTTATTCCAACAGCAATTTCATGGGTATGTTGAATGTCACAGGGAACATTGGCTTAGATAATAAACAGAATCTTTCAGAGCCAGAGAAATTTGAGTCTGCTGTGAATCAGACAATAAGTAATCTTACTAAGGTGGCATCTTTTGGTGTTTCGGCAAACATGTATGCTACTGGAGAAGTCCCCTTTGAGGATGAAACAATATATGCCTTAGTGCAGTGCACCAGAGATTTAACTGCCAGTGATTGCAGTAGGTGCCTGCAAAGTGCCATTGGAGATATACCAGGTTGCTGCTATGCCTCCATTGGGGGTAGAGTTCTGAGCCGTAGCTGTTATTTGAGGTATGAATTTTACGCCTTTTATCATGGTGCAACAGGACCCACGGATTCTTCAATTGGGAAGAAAGAAGGCGAAAATAATTCAAGCAAAATATGGGTTATTACAGGAATTATAGTTGTGGTTGGCTTGGTGATAGTATTTTTCATTTTCGGACTGTACCTTGTCAGGAATAAAAGAAAACGGCAGAGTAAGAATGGAATAGACAATCATCAAATCAATCTTGGATCTCTTCGAGTGgctaccaataatttttctgatttgaataagcttggacaaggtggctttggccctgtttacaaggggaaacttagtgatggtcaagaagtagcaatcaagaggctctcaacttgctctgaacaaggctcagaggaattcataaacgaggttcttctgataatgcaacttcaacacaaaaatcttgtaaagcttcttggattttgtgtagatggagaagagaagcttctggtatatgaatttttacccaatggcagtcttgatGTTGTACTCTTTGatccaaaccaacgtgaacgactagattggactaaacgcctggatatcataaatggaatagcaagggggatactatatcttcatgaggattctcgactaaaaataatccatagagacctaaaagcaagtaatatattgttggactatgacatgaacccaaagatctcagactttggaatggcaaggatatttgcaggaagtgaaggtgaagctaacactgctacaatagttggcacatatgggtatatggctccagagtatgcaatggagggactgtattccataaaatctgatgtttttgggtttggtgtactattgcttgagatcattgcagggaaacgtaacgcgggtttctatcactcTAAAAACACTCCAAGCCTTCTATCATATgcatggcatctatggaatgagggaaaggagatggaattaattgatcccttGTACGAGCTCTACCGTTTCTGCATTGCCTCCTCCAATCTCCCAAGGCACCATAAGCTGAGTAAAACTTTGTTTTCATGTTTTGGAATGGGATGA 1740 0.2489 MVSKPFQLLLLCTFALFSGVVFADPPYYICSTSSSFAKGSSFENNLTNLLSSLSSIASNYKFYNTSSYGIGPDRVYGLYMCLDYITNESCKTCITTATEDIVKLCPRATEAVVWEELCQLRYSNSNFMGMLNVTGNIGLDNKQNLSEPEKFESAVNQTISNLTKVASFGVSANMYATGEVPFEDETIYALVQCTRDLTASDCSRCLQSAIGDIPGCCYASIGGRVLSRSCYLRYEFYAFYHGATGPTDSSIGKKEGENNSSKIWVITGIIVVVGLVIVFFIFGLYLVRNKRKRQSKNGIDNHQINLGSLRVATNNFSDLNKLGQGGFGPVYKGKLSDGQEVAIKRLSTCSEQGSEEFINEVLLIMQLQHKNLVKLLGFCVDGEEKLLVYEFLPNGSLDVVLFDPNQRERLDWTKRLDIINGIARGILYLHEDSRLKIIHRDLKASNILLDYDMNPKISDFGMARIFAGSEGEANTATIVGTYGYMAPEYAMEGLYSIKSDVFGFGVLLLEIIAGKRNAGFYHSKNTPSLLSYAWHLWNEGKEMELIDPLYELYRFCIASSNLPRHHKLSKTLFSCFGMG 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00025 579 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 59 557 - -
Gma11g00025 579 ProSiteProfiles Gnk2-homologous domain profile. 133 239 IPR002902 -
Gma11g00025 579 SMART serkin_6 316 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00025 579 Gene3D - 25 127 IPR038408 -
Gma11g00025 579 Gene3D - 136 239 IPR038408 -
Gma11g00025 579 ProSiteProfiles Protein kinase domain profile. 316 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00025 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Gma11g00025 579 ProSiteProfiles Gnk2-homologous domain profile. 24 127 IPR002902 -
Gma11g00025 579 Gene3D Phosphorylase Kinase; domain 1 284 391 - -
Gma11g00025 579 Gene3D Transferase(Phosphotransferase) domain 1 392 574 - -
Gma11g00025 579 Pfam Salt stress response/antifungal 143 236 IPR002902 -
Gma11g00025 579 Pfam Salt stress response/antifungal 30 124 IPR002902 -
Gma11g00025 579 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 59 557 - -
Gma11g00025 579 SUPERFAMILY Protein kinase-like (PK-like) 302 552 IPR011009 -
Gma11g00025 579 Pfam Protein tyrosine and serine/threonine kinase 320 517 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00025 Gma-Chr11 179849 184710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00025 21 547 Receptor kinase-like Gene Family AT4G05200 45.000 1.58e-163 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g00025 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00025 - - gmx:100798666 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02409 01 58813360 58816103 Gma11g00025 11 179849 184710 GST