Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00006 ATGGGAACCAGGTACATGTGCGCTTTATTAATATTGTCTTTATTGCTTCATTCATTTATGTTTATTGGGGCAGAGGAAGGGGTGGGCGGAAGGGAAACTATAAGAGCAAGTGGCCACGTGCAAGGCGGTTATTTTTACGGCTCTCCACCTCCACCTCCCCCGAAGTGTCACCCACCGCCTCCACCTCCACCACCAGTAAGGTTGGAGAGAGCTCGCAGAGCGCTTGAAAAATTCACTCGTTTAGTGGATGACCCAAATGGGTATACGAGTAACTGGAAGGGTAGCGACGCTTGTAAGTTCAGGGGGGTGAGATGTGCGAAATATCCAGACGGACAGCAAGCAGTTGCGGGACTAGATCTGAATGGAGCTGGCCTCTCTGGAAAAAAATGTACAGCTCTCATGCTCTCCGGCCTCTTGGACAGGATACCAGAGCTCACATTCTTCCACGTCAACTCCAACAACTTCAGCGGTGCCATCCCAACCGACATCACCAAGTACAAATTTTTCTTCGAGTTAGACCTCAGTAACAACAAATTGGAGGGCGAGTTCCCAAAGGAAGTGCTCCAGCCCAAGCCCAAGGACCAGCAGCTGGTGTTCCTCGACCTCAGGTTCAACCGTCTCTCCGGCCCAATTCCACCCCAACTCTTTGACTTGGATCTCGATGTGATTTTCATCAACAACAATGAATTCACTGGCAATCTCCCCGATAACTTTGGCTCCACTCCTGCCAGGTACCTCACTTTTGCCAACAACCAGCTCACTGGTCCAATCCCCCCAAGCATCGGCAAAGCTTCCAAAACCCTCACCGAAGTCCTCTTCTTGGGCAACCACTTCCAGGGCTGCTTGCCCTTCCAAATTGGCTACCTCGTTAAGGCCACCGTCTTTGATGTCAGCAAAAACTCCTTAACGGGTCCCATCCCACACTCCTTTGCCTGCTTGGCAAGCATCCAGTTCCTCAACTTGGAGCACAACCAGTTTTACGGAGAAGTTCCGGAGATGCTTTGTCAGCTCCCAGGACTCCGCAACAATGGGAGCCTGTCTTTATCCGACAACTATTTCACTCAGGTTGGCCCTGCATGCAGGAACCTCATAAAAAACAAAGTGCTGGACGTGAGCAACAATTGCATCCTGGGTCTTCCAAATCAAAGGCCTCACGGACAATGCACAGAATTTTTCTCCAAGATCAAGCCCTGCCCAAATCCAAAGAATCTCCATTACGTCCCTTGTAAGGGATACTACCCGCACACCCACCCCGCCGCCGCCGCTCCTCCGCTAACTTACAACTCTCTCAACCCTCATCATCTTCATCGCTAG 1314 0.5099 MGTRYMCALLILSLLLHSFMFIGAEEGVGGRETIRASGHVQGGYFYGSPPPPPPKCHPPPPPPPPVRLERARRALEKFTRLVDDPNGYTSNWKGSDACKFRGVRCAKYPDGQQAVAGLDLNGAGLSGKKCTALMLSGLLDRIPELTFFHVNSNNFSGAIPTDITKYKFFFELDLSNNKLEGEFPKEVLQPKPKDQQLVFLDLRFNRLSGPIPPQLFDLDLDVIFINNNEFTGNLPDNFGSTPARYLTFANNQLTGPIPPSIGKASKTLTEVLFLGNHFQGCLPFQIGYLVKATVFDVSKNSLTGPIPHSFACLASIQFLNLEHNQFYGEVPEMLCQLPGLRNNGSLSLSDNYFTQVGPACRNLIKNKVLDVSNNCILGLPNQRPHGQCTEFFSKIKPCPNPKNLHYVPCKGYYPHTHPAAAAPPLTYNSLNPHHLHR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00006 437 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 37 417 - -
Gma11g00006 437 Gene3D Ribonuclease Inhibitor 243 407 IPR032675 -
Gma11g00006 437 Pfam Leucine rich repeat N-terminal domain 71 105 IPR013210 -
Gma11g00006 437 Gene3D Ribonuclease Inhibitor 68 241 IPR032675 -
Gma11g00006 437 PANTHER BNAC05G26270D PROTEIN 37 417 - -
Gma11g00006 437 MobiDBLite consensus disorder prediction 42 65 - -
Gma11g00006 437 SUPERFAMILY L domain-like 70 380 - -
Gma11g00006 437 MobiDBLite consensus disorder prediction 46 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00006 Gma-Chr11 30525 31999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00006 67 394 Leucine-rich Repeat extension Gene Families AT4G13340 43.505 5.33e-77 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00006 - - gmx:100795489 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02444 01 59055921 59057431 Gma11g00006 11 30525 31999 GST