Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02794 ATGCAACTCACGAGTTACAGGGGAACTGGAAAAGGAGGTTCTTTGTTCTTGATAGCTGGGGAATGCTGTATTACTATCGTAAACAGTGCAGCAAATCTTCTGATCATTTCACCAACGAAGAACTACACTTTGCAGGTAGAGAGTGCTCTGGAGCAAATGGATTGGATTGAAAAGATAACAGGTGTTATTGCCTCATTGTTGAGTTCTCAGATTCCTCAGAGAGAAGTCTTGCTTCTGTACATCTTGAGTGCCCCTCAAGGGGTTTGCAGCTGCAACAAGACTGGACTAAAAAGTGAGAAGCCAATTCATGTGTTACGAAGAGTTTGTGGGAACGATAAATGTGCTGATTGTGGTGCCCCTGAACCTGATTGGGCTTCACTAAATCTTGGTGTTCTTGTTTGTATTGAGTGTTCTGGTGTTCACCGAAACTTTGGTGTACACATATCAAAGCGCAAGGTAGGCGGGCCTAAGCATTATCCAAACTATGGGCCTAAAGGGTTCTTGCACAGAGGGGTGGAAATATATACTTGTGTCTGGTCAGGTCTCTCACACTGGATGCAAGTTTGGGAACCTTCTGTGATAAGTTTGTTTCAGTCTCTTGGGAATGCTTTTGCCAACACGGTCTGGGAGGAACTATTGGAATCAAGAAGTTCATTTCAGGTTGATCTTGTCCCCACAGGAGAAATTATTCCTACACTTGTTCTTGGCCATCTCAACTAA 720 0.4375 MQLTSYRGTGKGGSLFLIAGECCITIVNSAANLLIISPTKNYTLQVESALEQMDWIEKITGVIASLLSSQIPQREVLLLYILSAPQGVCSCNKTGLKSEKPIHVLRRVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNFGVHISKRKVGGPKHYPNYGPKGFLHRGVEIYTCVWSGLSHWMQVWEPSVISLFQSLGNAFANTVWEELLESRSSFQVDLVPTGEIIPTLVLGHLN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02794 239 SUPERFAMILY ArfGap/RecO-like zinc finger 99 156 IPR037278 -
Gma10g02794 239 Gene3D Arf GTPase activating protein 89 225 IPR038508 -
Gma10g02794 239 CDD ArfGap 105 216 - -
Gma10g02794 239 SUPERFAMILY PH domain-like 21 75 - -
Gma10g02794 239 PRINTS HIV Rev interacting protein signature 130 147 IPR001164 GO:0005096
Gma10g02794 239 PRINTS HIV Rev interacting protein signature 181 202 IPR001164 GO:0005096
Gma10g02794 239 PRINTS HIV Rev interacting protein signature 111 130 IPR001164 GO:0005096
Gma10g02794 239 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 35 75 - -
Gma10g02794 239 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 91 150 - -
Gma10g02794 239 PANTHER CENTAURIN/ARF 91 150 IPR045258 GO:0005096
Gma10g02794 239 ProSiteProfiles ARF GTPase-activating proteins domain profile. 99 210 IPR001164 GO:0005096
Gma10g02794 239 PANTHER CENTAURIN/ARF 35 75 IPR045258 GO:0005096
Gma10g02794 239 Pfam Putative GTPase activating protein for Arf 102 152 IPR001164 GO:0005096
Gma10g02794 239 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 169 229 - -
Gma10g02794 239 PANTHER CENTAURIN/ARF 169 229 IPR045258 GO:0005096
Gma10g02794 239 SMART arf_gap_3 99 228 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02794 Gma-Chr10 55022638 55027078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02794 110 150 C2H2 Transcription Factor Family AT3G07940 73.171 8.41e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02794 K12489 - gmx:100798227 223.787