Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02781 ATGCGAGGTCCCAGGGCTAGAGCCTgctctgataccatGACTTGGGTATTTTCCCAATACCAAGAAGAACTAGAATCAGTGGCAAGCTCAAGAAATTACAGGACCTTGTACCCAATATGGATATATAAGCAAACAAGCTATGCTGACATGCTCGATTTGGCCGTTCAACATATTAAAGGTCTTCAAACTCAGCTTCAGAACCTTCACAGAGAACTGGAGAATTGCACCTGCGGATGCAAACCAAGCAAATAA 252 0.4127 MRGPRARACSDTMTWVFSQYQEELESVASSRNYRTLYPIWIYKQTSYADMLDLAVQHIKGLQTQLQNLHRELENCTCGCKPSK 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02781 83 PANTHER TRANSCRIPTION FACTOR BHLH128 42 81 - -
Gma10g02781 83 Coils Coil 51 71 - -
Gma10g02781 83 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 42 81 - -
Gma10g02781 83 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 78 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02781 Gma-Chr10 54922409 54923347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02781 43 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 80.952 1.80e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02781 - - gmx:100819319 81.2629