Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02771 ATGGCTGACGCCAGTCCTAGAACTGATATTTCTACAGATGTTGACACGGATGATAAGAATCCACGGTTTGATAGAAGTCAGTCCCTTGTTGCTGTGGCTTCTGACTCCAGTGAcagatcaaaggataaatcagatcagaagAGTCTCCGGAGGCTTGCTCAGAATCGCGAGGCTGCAAGAAAAAGTCGGTTGAGAAAGAAAGCTTATGTTCAACAGCTCGAAAGTAGTCGCTTAAAGTTGACCCAACTGGAGCAAGAGCTTCAGAGAGCTAGGCAGCAGGGAATCTTTATATCAAACTCAGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCTATGGCATTTGATGTAGAATATGCAAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCAGGTGTAAATTCTCATGCAGGTGATACAGAACTTCGCATGATTATCGATGGTATAATGGCACATTATGATGAGATATTTAGGCTGAAGGCCAATGCAGCTAAGGCTGATGTCTTCCATTTGCTGTCTGGAATGTGGAAGACACCAGCAGAGAGGTGTTTTCTATGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTCCTGGTAAATCAGTTGGAACCTCTGACGGAGCAACAGTTAGTGGGTATCACCAACTTGCAGCAATCTTCCCAACAAGCAGAAGATGCTTTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTTCTGAGACATTATCCACTGGATCACTTGGCTCCTCTGGTTCATCAGGCAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAACTAGGGACACTTGAGGGATTCATTAAGCAGGCTGACAACTTGCGCCAGCAGACGTTGCATCAAATTCACCGCATATTGACAACTCGGCAGTCGGCTCGTGCACTACTTGCAATACATGACTACTTTTCTAGGTTGCGTGCCCTTAGCTCTCTTTGGCTTGCCCGCCCAAGAGACTGA 999 0.4525 MADASPRTDISTDVDTDDKNPRFDRSQSLVAVASDSSDRSKDKSDQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISNSGDQAHSMSGNGAMAFDVEYARWLEEQNRQINELRAGVNSHAGDTELRMIIDGIMAHYDEIFRLKANAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLSETLSTGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIKQADNLRQQTLHQIHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02771 332 Pfam Basic region leucine zipper 43 89 IPR004827 GO:0003700|GO:0006355
Gma10g02771 332 ProSiteProfiles DOG1 domain profile. 112 329 IPR025422 GO:0006351|GO:0043565
Gma10g02771 332 Gene3D - 46 98 - -
Gma10g02771 332 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 1 332 - -
Gma10g02771 332 PANTHER TRANSCRIPTION FACTOR TGA9 1 332 - -
Gma10g02771 332 MobiDBLite consensus disorder prediction 1 65 - -
Gma10g02771 332 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
Gma10g02771 332 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Gma10g02771 332 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Gma10g02771 332 Coils Coil 66 93 - -
Gma10g02771 332 MobiDBLite consensus disorder prediction 36 59 - -
Gma10g02771 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Gma10g02771 332 MobiDBLite consensus disorder prediction 10 24 - -
Gma10g02771 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02771 Gma-Chr10 54823475 54827535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02771 1 332 bZIP Transcription Factor Family AT3G12250 78.916 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma10g02771 DOG1 5.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02771 K14431 - gmx:100816123 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02771 10 54823475 54827535 Gma20g02288 20 50009117 50015288 GST