Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02679 ATGTCGAACTCCGACGCCACCACTAACGGCGTCAGTAACGGCGCCATCATTGATGCGCAGAGACAGCAGGCCTTAGCCGTTAAGAAGCCGCCGTCTAAGGACCGTCACAGCAAGGTGGACGGCCGAGGGCGCCGCATAAGGATGCCAATCATATGCGCCGCACGTGTGTTCCAGCTCACGCGCGAGCTTGGCCACAAGTCCGACGGTCAAACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCCATCATCGCCGCCACCGGCTCCGGAACCACCCCCGCCAGCTTCTCCTCCGTCTCCCTCTCCGTCCGCGCCGCCGCCAACTCCCTCTCCTCCCCTTCCTCCACCTCCGACCACAAGCCCCAGTTACTCTCTCCCACTCCCTTCATCCTCGGCAAGCGCATACGCACCGACGAAGACTCTTCCAAAGACGAAGCTGTCTCCGTGGGGCCCTCTCTTGTGGGCCCTTCTACTCCTCCCGGACTGTGGGCCCTCCCGGCCCGGCCCGATTTCGGACAAATTTGGAGCTTCGCCGCCGCCGCTGCTCCCGAAATGGTGTCGGTGTCGCAGCAGCAGCAGGCTTCATTGTTCGCTCATCACCACCGTCAGCAGCAGCAGCAAGCCATCGGAGAAGCTTCGGCGGCGAGGGTGGGAAATTACCTTCCTGGACATCTGAATTTGCTCGCCTCATTGTCTGGTGGACCTGGGAATTCTGGTCGGAGAGACGATGAGCCTCGTTGA 741 0.6235 MSNSDATTNGVSNGAIIDAQRQQALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSSVSLSVRAAANSLSSPSSTSDHKPQLLSPTPFILGKRIRTDEDSSKDEAVSVGPSLVGPSTPPGLWALPARPDFGQIWSFAAAAAPEMVSVSQQQQASLFAHHHRQQQQQAIGEASAARVGNYLPGHLNLLASLSGGPGNSGRRDDEPR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02679 246 MobiDBLite consensus disorder prediction 109 123 - -
Gma10g02679 246 MobiDBLite consensus disorder prediction 1 19 - -
Gma10g02679 246 MobiDBLite consensus disorder prediction 1 42 - -
Gma10g02679 246 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 243 - -
Gma10g02679 246 ProSiteProfiles TCP domain profile. 32 86 IPR017887 -
Gma10g02679 246 MobiDBLite consensus disorder prediction 28 42 - -
Gma10g02679 246 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 243 IPR005333 GO:0003700
Gma10g02679 246 MobiDBLite consensus disorder prediction 109 130 - -
Gma10g02679 246 Pfam TCP family transcription factor 32 145 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02679 Gma-Chr10 54060299 54061039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02679 12 246 TCP Transcription Factor Family AT5G23280 66.807 4.83e-100 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma10g02679 TCP 4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02679 K16221 - gmx:100799005 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02679 10 54060299 54061039 Gma20g01006 20 36692351 36694249 GST