Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02664 ATGGCGCGCGGAAGGAAGAAGCGGCAAAAGAACACAGCTATTATTCCTGTGGATGCAAACCCCACTCAGCAAATAACCCAATCCTTGGATATTGATGCTGAGTGTGAGAGTGAGACCAAAAGGATGAAATTTGCTGAGAACAACGGTGGTGGGGCAGGGGGTTCTTCTTCTGTtgtgaaaaagaagcgtggcagaaaaagtaaaaaggagaaggaaaacatggaaaagatgttagagagcaatttcttggagaagagagatgctcaaaacgacaaccatggtgaaaatgctgaagtgggaggttcttcttctgtttcagaaggtgtgaaaaagaagcgtggaagaaagagtaaaaaggagaaggaggacatggaaaagatgaagatgttagaggagaaagatgctcaaaacgaaaaccatggtgaaaatggtgtagtgggaggttcttcttctgtttcagaaggcgtgaaaaaaaagcgtggaagaaagagtaaaaaggagaaggaggacatggaaaggaagatgttagaggagaaagatgctcaaaacgaaaaccatggtaaacatgttgaagtgggaggttcttcttctctttctgaaggtgtgaaaaataagcgtggaagaaagagtaaaaaggagaaacaggacatggaaaataagatgatagaggagaaggatgctcaataccaaaaccttggtgaaagtggcggcgtaggaggttcttcttccgttcaagaagttgcggcaaagaagcatggcagaaaaagtaaggaggagaaggaggacatgaaaaggaagGAGATGCTAGAGGACAATTTGTTGGAGGAGAAAGATGTTCAAGACAAAAACCATGGTGAAAATGGTGGGGTACCTGATACGAGGCATGGAAGAAAAAGAAAGACGCTTAAGGAAGATGATGGTGAGTTGCCTGCGGATTCTCCAGGAAGTGGCATTCAGAAACACTATAGTCTCAGGGCCCCTAAAGTCAATACAGAAGCCGTGATGCCAAACATCAGCAAGAAAGATCCTAAGTGCCTTAAAGAGGAGTCCTTAATGTGTCATCAATGCCAGAGAAATGATAAAGGCAGGGTTGTGAGATGCACAAGTTGTAAGAGGAAAAGATTTTGTGTACACTGTATAGAAAATTGGTATCCTCATTTGAAAGAGGATTATATTGCTGAGGCATGTCCTGTGTGCCGTGGTAATTGCAACTGCAAAGCATGCTTGAGATCCAATGAACTTATTAAAAAAATGAAGAAAAAAGCAAAAACCAATGAAGACGAGAAGGTTGAACTCTCTATGCATTTGCTGCAAGTACTTCTTCCCTATTTAAGGCTGCTGGATGAAGAACAGATGATTGAGTATAAGACAGAAGCAAAGATACAGGGGCTCTCAGTCTCAGAGCTAAATATAGTACAGGCAAATTTTGATGAAGATGAGCGTGTGTACTGTGACAACTGTAAAACGTCAATATTTGATTACCACAGAAGCTGTACAAAATGCTCTTTCGACCTTTGTCTCATCTGTTGTCGTGAACTTCGTAGTGGGGAGCTTGTAGGTGGTGCAGATCCAATTTTGGTAGAGTTTGTCTGTCAGGGTCGTCATTACCTGCATGATGAAAAAGAAAGTAAAAGTGTAAAACGAAATGAACCAAATGCTGTTGCTCCTGTAGTTCGTGAATGGTCAAGATCTGGGTGGCATGCAGAAAGTAATGGTAGCattccttgtccaaaagtcaatgatgaatgtaaccatggttttcttgaactgagaagcatattaggtcaacattttatcaccaatttagtgcataaagcaaacaaactggcacaagcatacaagcttcaagatgtagttaagatacctgacaacttctgttcgtgtttgaggcttgatagaaacacagatgctagatataataatatgaggaaggctgcttctcgggcagattccggtgacaactatttatactgtccaagggttgtagatctacaggatgaggatttaaggcactttcagtggcattgggaaaagggggagcctgtcattgtcagcaatgtgcttgcaaaaacatctggtttaagctgggaaccacttgtcatgtggcgtgcattccgtcagatgactaagaccaagcatgaacaacatttggatgtgaaggcaattgattgcttagattggtgtgagggagaaattaatatccaccaattctttactgggtatacagaaggtcgtgaggattggcttcgctggcctcaaatattgaaattaaaagattggcctccttctaatttatttgaggaacgtttgcctcgacattgtgcagagttcatatcttccttgcccttcaaggagtatactgatcctctcaaaggttctcttaacttagctgtgaagttgcctatgggttgtctaaaaccagacatgggaccaaagacatatattgcttatggatttcatcaggagctcgggcgtggtgattcagtgactaagctccattgtgatatgtccgatgcagtaaatgtgttgactcatattgctgaagtgaaattgaaaccagaccatcttattgtcattgaggagttgaaacaaaagcactttgaacaagacaaaagggaactacttggtgatgatcagaatagagaaactagtgttgacatgcttaataatacatcttctactaatgctttggataagcaaaacagtgtccaaatcatggaacacaaaggtggattatgtgatggaaaagaagtgtatcagttccatcaaccctctggtggtaatgcggttgccattgctaatgaggatggtctttcatgcggatcaaagcttaaagaggttgacaaagtaaaactaaagcaagaaagtgatatgttgtctgcgggggatggttcagaaggtgctctctgggatatttttcggaggcaggatgtacctaaattgcaggaatatctgaggaagcatttcagagagttcaggcatattcattgctgtcctttaaagcagGTTATTCACCCCATCCATGACCAGACCTTCTATCTGACTGTGGAGCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTATTCAGAAGGTAGGGGATGCTGTTTTTGTTCCAGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATTAAGGTTGCATTGGATTTTGTCTCTCCGGAAAATGTTGGGGAGTGCTTTCGTTTGACAGAGGAATTTCGCACACTTCCAATTAGCCATGCGTCTAGTGAGGACAAATTGGAGGTGAAGAAGATGACAATATATGCTATGCAAGATGTGATCGGAAAATTGGAGGAAGCAAGGTCCGGGAAAACCAAGGTTCCAGAGTAA 3372 0.1856 MARGRKKRQKNTAIIPVDANPTQQITQSLDIDAECESETKRMKFAENNGGGAGGSSSVVKKKRGRKSKKEKENMEKMLESNFLEKRDAQNDNHGENAEVGGSSSVSEGVKKKRGRKSKKEKEDMEKMKMLEEKDAQNENHGENGVVGGSSSVSEGVKKKRGRKSKKEKEDMERKMLEEKDAQNENHGKHVEVGGSSSLSEGVKNKRGRKSKKEKQDMENKMIEEKDAQYQNLGESGGVGGSSSVQEVAAKKHGRKSKEEKEDMKRKEMLEDNLLEEKDVQDKNHGENGGVPDTRHGRKRKTLKEDDGELPADSPGSGIQKHYSLRAPKVNTEAVMPNISKKDPKCLKEESLMCHQCQRNDKGRVVRCTSCKRKRFCVHCIENWYPHLKEDYIAEACPVCRGNCNCKACLRSNELIKKMKKKAKTNEDEKVELSMHLLQVLLPYLRLLDEEQMIEYKTEAKIQGLSVSELNIVQANFDEDERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGELVGGADPILVEFVCQGRHYLHDEKESKSVKRNEPNAVAPVVREWSRSGWHAESNGSIPCPKVNDECNHGFLELRSILGQHFITNLVHKANKLAQAYKLQDVVKIPDNFCSCLRLDRNTDARYNNMRKAASRADSGDNYLYCPRVVDLQDEDLRHFQWHWEKGEPVIVSNVLAKTSGLSWEPLVMWRAFRQMTKTKHEQHLDVKAIDCLDWCEGEINIHQFFTGYTEGREDWLRWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTDPLKGSLNLAVKLPMGCLKPDMGPKTYIAYGFHQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLKPDHLIVIEELKQKHFEQDKRELLGDDQNRETSVDMLNNTSSTNALDKQNSVQIMEHKGGLCDGKEVYQFHQPSGGNAVAIANEDGLSCGSKLKEVDKVKLKQESDMLSAGDGSEGALWDIFRRQDVPKLQEYLRKHFREFRHIHCCPLKQVIHPIHDQTFYLTVEHKRKLKEEYGIEPWTFIQKVGDAVFVPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPISHASSEDKLEVKKMTIYAMQDVIGKLEEARSGKTKVPE 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02664 1123 ProSiteProfiles JmjC domain profile. 789 1081 IPR003347 -
Gma10g02664 1123 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 55 1113 IPR045109 GO:0032454|GO:0033169
Gma10g02664 1123 MobiDBLite consensus disorder prediction 248 310 - -
Gma10g02664 1123 Gene3D Cupin 658 1090 - -
Gma10g02664 1123 ProSiteProfiles Zinc finger RING-type profile. 353 400 IPR001841 -
Gma10g02664 1123 SMART cupin_9 770 1081 IPR003347 -
Gma10g02664 1123 MobiDBLite consensus disorder prediction 165 187 - -
Gma10g02664 1123 Pfam JmjC domain, hydroxylase 968 1064 IPR003347 -
Gma10g02664 1123 Coils Coil 164 184 - -
Gma10g02664 1123 MobiDBLite consensus disorder prediction 202 227 - -
Gma10g02664 1123 MobiDBLite consensus disorder prediction 118 139 - -
Gma10g02664 1123 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 348 415 IPR018866 -
Gma10g02664 1123 SUPERFAMILY Clavaminate synthase-like 660 1101 - -
Gma10g02664 1123 MobiDBLite consensus disorder prediction 68 93 - -
Gma10g02664 1123 MobiDBLite consensus disorder prediction 1 322 - -
Gma10g02664 1123 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02664 Gma-Chr10 53987024 53996053 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma10g02664 JmjC 1.9e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02664 K15601 - gmx:100805723 2038.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02664 10 53987024 53996053 Gma20g01017 20 36772117 36792203 GST