Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02662 ATGCAATCTATCAGGAAGTCCTTTAAATCTTATGGTTCCTACAACAAACATTCTAGGTTTTTTGGCGCCGGAAACACCGATCCCGAACACGAGCAACTCCCCATTCTCCTCGACCAGCAAACCCTCCGCCAATCCGCCATGCCCGCCGGTGACTACGTCGTCAAAATCAACGAGGACGGAAGCGAGGCCCCTCAGGACAACAAGATTTGGCGCGAGTCCAGCTACGAATTCTGGAATAACGAcaccaccaccaccaccaccaccaccaccaTCCCTGGCAGCAGCGAAGAGAGCTTCGATTTCCGCCATTCGGAGGACCCGCCGTCGCAGCTGATCGGACGCTTCCTCCACAAGCAGCGAGCCTCCGGCGAGATGCAGCTCGACATGGATTTGGAGATGGAGGAGCTGCAGCGCGAAGGCGGCGACGACGACGACGACGGAAAGTTAACGCCGGTTGAGGAATCTCCGATGACACACCGCGTCTCGAGAGAGCTCAAGGTTTCCTTCGAGGAACCTGCCTACAATGTGAATTTCCTCGAAACGCAAAACGACGCCGTCAGAAGAAGGCACAGCAAGGACTCGCCGTCTCTCGCGGAGTTCCAACGCCCTCCCCAACCGCCGCAATACGACCGTCGCCGGTCTCCCTCGCCGTCGCCAGCCTGCGGCGACGAGGTTGTTCGGTGCACCTCGAACGCTTCCTTCGAAAGAAACCTTTCCATGCAGAGAAAATCGGCCTTGTTGAAGGCCAAAACGAGGTCTAGGCTAATGGACCCGCCCGAAGAACCCGACAGAAAATCGGGTCGTGTTTTAAAATCGGGCCAACTCCTATCCGGGTTTTTGGGGAAGAAGAATGACGAAGAGGATGATGATCCGTTTTTGGAAGAGGATCTTCCTGATGAGTTTAAGGAGACTCATTTCAGCTTGTGGATTCTTCTCGAGTGGTTGAGTTTGATTTCGATCATTGGGTTGTTGATAACCACCCTTTGTGTTCCCTTTCTGAGGAACAAGAATCTGTGGCAGCTTAGGTTGTGGAAATGGGAGGTTATGGTTTTGGTTTTGATCTGTGGCAGGTTGGTGTCTGATTGGGTTGTTAGGATTGCTGTGTTCTGCATTGAGAGAAACTTCCTTTTGAGGAAGAGGGTATTGTATTTTGTGTATGGTGTGAGGAAGGCTGTTCAGAATTGTGTTTGGTTGGGGCTTGTGTTGATTGCTTGGCATTTGTTGTTTGACAAGAGGGTGCAGAGGGAGACCCACAGTGATTTCCTCGAGTATGTGACTAAGGTGTTGGTGTGTTTCCTTGTGGGGACTTTGGTGTGGTTGTTGAAGACCCTTATGGTGAAGGTGTTGGCTTCCTCTTTTCATGTGAGTACCTACTTTGACAGGATTCAGGAGTCGCTGTTTAATCAGTTTGTGATTGAGACGCTTTCAGGGCCGCCTTTGGTGGAGATTCAGAAGGCCGAGGAGGAGGAGGAGAGGCTTGCTGATGAGGTTCAGAAGCTTCAGAATGCTGGGGTTACCATACCCCCTGATCTTAGGGCATCTGCTTTTTCTAATATTAAGAGTGGCAGGCTGAGGAGTGGAATGCTGCAGAAAAGCCCCAGAGTTAAGAGCGGCAAGTTTTCGCGGCCACTTTCCAAGAAGTCTGATGAGGGGAATGTGATCACTATGGATAATCTGCATAAGCTCAATCCCAATAATATCTCTGCCTGGAATATGAAAAGGTTGATGAACATGGTCCGGCATGGGGCTCTTTCTACCCTGGATGAACAGATTCTTGATAACTCGAATGATGACGACAATGCCACGCAAATTAGAAGTGAATACGAGGCAAAGGCTGCAGCTAAGAAAATATTTCACAATGTTGCTAGGCGCGGCTGCAGGTATATATACCCGGATGACTTGATGCGGTTTATGCGAGAAGATGAAGCTGCAAAAACCATGAATCTCTTTGAAGGAGCTTCTGAAGCTGGGAAAATCAGCAAATCAGCCTTGAAGAACTGGGTGGTTAATGCCTTCAGGGAAAGGAGAGCACTTGCTTTGACATTGAATGATACCAAAACGGCAGTGAACAAACTTCATCGAATGCTCAATTTTATAGTTGGAATTATTATACTGGTTATTTGGCTCTTGATATTGGAACTTGCCACCACCAAATTTCTTCTCTTTGTGAGCTCACAGGTTGTCGTGGTTGCATTTATATTTGGAAACACCTGCAAGACCATATTTGAAGCAATTATTTTCTTATTTGTCATGCACCCATTTGATGTGGGAGATAGATGTGAAATTGATGGGGTTCAGATGGTTGTAGAAGAAATGAACATATTGACAACCATATTTCTGAGATTTGATAATCAAAAGGTCATCATCCCTAACAATGTCCTTGCTACCAAGGCCATATATAACTATTACCGGAGTCCTGACATGGGAGATGCTATCGAATTCTGTGTACATATATCTACCCCAGTTGAAAAGATTTCACTCATTAAACACAGAATACAAAGTTACATTGATAACAAGAAGGAGCACTGGTATCCTTCACCTTTGATTGTATACAGGGATTATGACCAATTAAACATGGTGAGGTTGGCTATCTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAAAGGTTTGTGAGGAGATCCCTTTTGCTTGAAGAGATGATCAAGATTTTCAGGGAGCTTGACATTAATTACCGGCTCTTGCCCATGGACATTAATGTGAGAGCCACTCCTACCACTTCTGATCGGCTTCCACCTAGTTGGACATCAGTTCCAACTCCAAGTTGA 2793 0.4654 MQSIRKSFKSYGSYNKHSRFFGAGNTDPEHEQLPILLDQQTLRQSAMPAGDYVVKINEDGSEAPQDNKIWRESSYEFWNNDTTTTTTTTTIPGSSEESFDFRHSEDPPSQLIGRFLHKQRASGEMQLDMDLEMEELQREGGDDDDDGKLTPVEESPMTHRVSRELKVSFEEPAYNVNFLETQNDAVRRRHSKDSPSLAEFQRPPQPPQYDRRRSPSPSPACGDEVVRCTSNASFERNLSMQRKSALLKAKTRSRLMDPPEEPDRKSGRVLKSGQLLSGFLGKKNDEEDDDPFLEEDLPDEFKETHFSLWILLEWLSLISIIGLLITTLCVPFLRNKNLWQLRLWKWEVMVLVLICGRLVSDWVVRIAVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHLLFDKRVQRETHSDFLEYVTKVLVCFLVGTLVWLLKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIQKAEEEEERLADEVQKLQNAGVTIPPDLRASAFSNIKSGRLRSGMLQKSPRVKSGKFSRPLSKKSDEGNVITMDNLHKLNPNNISAWNMKRLMNMVRHGALSTLDEQILDNSNDDDNATQIRSEYEAKAAAKKIFHNVARRGCRYIYPDDLMRFMREDEAAKTMNLFEGASEAGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFIVGIIILVIWLLILELATTKFLLFVSSQVVVVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRFDNQKVIIPNNVLATKAIYNYYRSPDMGDAIEFCVHISTPVEKISLIKHRIQSYIDNKKEHWYPSPLIVYRDYDQLNMVRLAIWPTHRMNFQDMGERFVRRSLLLEEMIKIFRELDINYRLLPMDINVRATPTTSDRLPPSWTSVPTPS 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02662 930 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2 917 - -
Gma10g02662 930 MobiDBLite consensus disorder prediction 80 106 - -
Gma10g02662 930 MobiDBLite consensus disorder prediction 184 224 - -
Gma10g02662 930 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 2 917 IPR016688 -
Gma10g02662 930 PIRSF Memb_At2g17000 41 930 IPR016688 -
Gma10g02662 930 MobiDBLite consensus disorder prediction 142 162 - -
Gma10g02662 930 MobiDBLite consensus disorder prediction 137 162 - -
Gma10g02662 930 SUPERFAMILY Sm-like ribonucleoproteins 743 802 IPR010920 -
Gma10g02662 930 MobiDBLite consensus disorder prediction 80 97 - -
Gma10g02662 930 Gene3D - 753 802 IPR023408 -
Gma10g02662 930 MobiDBLite consensus disorder prediction 1 27 - -
Gma10g02662 930 Pfam Mechanosensitive ion channel 695 899 IPR006685 GO:0016020|GO:0055085
Gma10g02662 930 Coils Coil 480 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02662 Gma-Chr10 53949203 53953220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02662 51 930 Mechanosensitive Ion Channel Family AT1G78610 58.370 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02662 K22048 - gmx:102665658 1739.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02662 10 53949203 53953220 Gma20g01021 20 36880269 36884252 GST