Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02651 ATGCGTAAAAATGCAGTTACTCTTCAAATCAAGATCCGTGTTGCTAACCCACAGTCCCTCCCTCACCCACGTCTCTCCCCGCTTCAGATCTTAAACGTCTTTCGCTGTTCCAAGATGGGTGTGGCTGAGAACATTCCCGATATGGAGGAGGGTACCTTGGAGATTGGAATGGAATACAGAACTGTATCTGGAGTTGCTGGACCATTGGTCATTCTTGACAAAGTTAAGGGACCCAAATTTCAAGAGATTGTTAATATTCGTTTAGGAGATGGAACTACTCGGCGTGGACAAGTTCTAGAGGTTGATGGTGAAAAAGCTGTTGTTCAGGTATTTGAAGGTACATCTGGAATCGACAATAAATTTACGACTGTGCAATTTACTGGAGAGGTGTTAAAAACTCCTGTCTCACTAGACATGCTTGGACGCATATTTAATGGCTCTGGAAAACCAATTGATAATGGTCCACCAATTTTACCTGAGGCTTACCTGGATATTTCTGGAAGTTCCATCAATCCTAGTGAGCGAACCTACCCTGAGGAGATGATACAGACTGGAATATCTACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATCCCTCTATTCTCAGCAGCCGGTCTCCCCCATAATGAAATCGCTGCACAGATCTGTCGTCAGGCTGGCTTAGTCAAGCGACTAGAGAAATCTGATAATCTTCTTGAGGGTGGAGAAGAGGACAATTTTGCTATTGTATTTGCAGCTATGGGAGTTAACATGGAGACTGCACAGTTTTTCAAACGTGACTTTGAGGAGAATGGATCAATGGAGAGAGTGACTCTTTTCCTTAATTTGGCAAATGATCCTACAATTGAACGTATTATCACTCCTCGTATTGCTCTTACTACTGCTGAATATTTGGCTTATGAATGTGGCAAGCATGTTCTTGTGATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTGCCAGGAAGACGTGGTTATCCTGGATATATGTATACAGATCTTGCAACAATTTATGAACGAGCTGGGAGAATTGAGGGGCGTAAAGGCTCTATTACACAAATTCCAATTCTAACCATGCCCAATGATGATATTACGCACCCAACTCCTGATCTAACAGGATATATCACTGAGGGGCAGATATACATCGACAGGCAGCTGTATAATAGACAGCAGATATACCCACCAATCAATGTCCTCCCGTCACTATCTCGGTTGATGAAGAGTGCTATTGGTGAGGGAATGACTAGAAAGGATCATTCTGATGTGTCCAACCAGCTCTACGCAAATTATGCTATCGGAAAGGATGTGCAGGCAATGAAAGCAGTGGTTGGAGAAGAAGCACTTTCATCTGAGGACCTGCTGTATCTGGAATTTTTGGAGAAGTTTGAGAGAAAGTTTGTTGCCCAGGGAGCTTATGACACCCGCAATATATTCCAGTCACTAGATCTTGCATGGACTTTACTCCGGATTTTCCCCCGTGAACTTCTTCATCGTATACCTGCCAAGACTCTTGACCAGTTTTATAGCCGAGATGCTGGCAATTGA 1584 0.4324 MRKNAVTLQIKIRVANPQSLPHPRLSPLQILNVFRCSKMGVAENIPDMEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLEKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDAGN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02651 527 Pfam ATP synthase alpha/beta family, beta-barrel domain 62 128 IPR004100 GO:0046034|GO:1902600
Gma10g02651 527 Gene3D - 67 526 - -
Gma10g02651 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 422 IPR027417 -
Gma10g02651 527 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 41 527 IPR022879 -
Gma10g02651 527 CDD ATP-synt_V_A-type_beta_C 426 520 - -
Gma10g02651 527 PIRSF V-ATPsynth_beta/V-ATPase_B 49 527 IPR022879 -
Gma10g02651 527 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 185 416 IPR000194 GO:0005524
Gma10g02651 527 CDD ATP-synt_V_A-type_beta_N 58 129 - -
Gma10g02651 527 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 41 527 - -
Gma10g02651 527 ProSitePatterns ATP synthase alpha and beta subunits signature. 407 416 IPR020003 GO:0005524
Gma10g02651 527 Hamap V-type ATP synthase beta chain [atpB]. 56 525 IPR022879 -
Gma10g02651 527 CDD V_A-ATPase_B 130 418 - -
Gma10g02651 527 TIGRFAM V-ATPase_V1_B: V-type ATPase, B subunit 58 525 IPR005723 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02651 Gma-Chr10 53862549 53869066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02651 37 527 Primary Pumps ATPases(2) AT4G38510 96.538 0.0 963
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02651 K02147 - gmx:100791429 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02651 10 53862549 53869066 Gma20g01035 20 36989415 36997119 GST