Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02616 ATGAGGGACTTCACTACGGGGTTGCCTTACTGCTGCTTTCCGACGTGGTACACGAGGTCGCCTCAACCTGCTGATATTGAATCAGCTGTTAAGTGGGCCTCTCGACAGAGAGACCTCAACAAGCCCATTTTCGTTCACTGTGCTTATGGTCATGGAAGAAGTGTTGCTGTTATGTGTGCACTGTTAGTAGCACGAGGCATCACAGAGGATTGGAAGAATGCTGAGAAGCTTATCAAGCAAAAACGACCTTACATCCGGATGAATGCTCTCCATCGCAAGGCACTTGAAGAATGGTCCAGACACCAATTGTCTGCACCGAGGAAGTAG 327 0.4893 MRDFTTGLPYCCFPTWYTRSPQPADIESAVKWASRQRDLNKPIFVHCAYGHGRSVAVMCALLVARGITEDWKNAEKLIKQKRPYIRMNALHRKALEEWSRHQLSAPRK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02616 108 PANTHER - 6 105 - -
Gma10g02616 108 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 7 100 IPR029021 -
Gma10g02616 108 Pfam Dual specificity phosphatase, catalytic domain 24 100 IPR000340 GO:0008138|GO:0016311
Gma10g02616 108 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 24 93 IPR000387 GO:0016311|GO:0016791
Gma10g02616 108 Gene3D Protein tyrosine phosphatase superfamily 2 104 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02616 Gma-Chr10 53537016 53539266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02616 8 102 Protein tyrosine phosphatase (PTP) family AT5G56610 31.959 1.83e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02616 - - gmx:100804705 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02616 10 53537016 53539266 Gma20g01072 20 37375011 37378571 GST