Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02614 ATGGACACGTCAAATCCTGCTGTATTTGTAAATGCTCAGTTGATTCCCAACTTTATAGGGAAGAAAGTAAGAACAGTGGTTCAGGTGAGCCAATGTGATGGTGGGGTTGCCACAGCAAAATCCACAGATGACTGTCAATTAACCATAAAAGGGTTGCCACAAGTCCCTCTTATGAACTATATTGAGGTCATTGGCATTGCTGAAAGTAACAACTCTATTGATGCCGAAATATGGACTGACTTTGGCAGCACATTTGACACCTTCTCTTACAATCAGTTGTGCCAACTAGCCAATGGTGAATTTAAGGGAGTTTCTCTTCTTATCTTGATTTATCTCATTAATCTTGCTCCTGCATATCCTCTTCACCACACCTTGCTTTCAGAAATTGTGCAGAATAGCAAGTTCGAAGATAAGGGAATACTATATGGAAGTAGGATAGGAGGCGCTGGTCATGGAGGCAGTTCACACGGAAATGGAAATGGAAATTCAGGATCACCTGAAACACGAGGAGGAGGAGCTGCACTTATACCTGTTTATGCAGCAGGTGCTGCAAACAAAAATCACCAACATCAGACCCGTCATGGTGCTGCAAACTGCAACCTTAACAAAATCAGATTTTCCAACTTGCTTATGATCATCCTGGTCTATCCTCTCATACTGTCATTTTTGTTGTAA 675 0.4178 MDTSNPAVFVNAQLIPNFIGKKVRTVVQVSQCDGGVATAKSTDDCQLTIKGLPQVPLMNYIEVIGIAESNNSIDAEIWTDFGSTFDTFSYNQLCQLANGEFKGVSLLILIYLINLAPAYPLHHTLLSEIVQNSKFEDKGILYGSRIGGAGHGGSSHGNGNGNSGSPETRGGGAALIPVYAAGAANKNHQHQTRHGAANCNLNKIRFSNLLMIILVYPLILSFLL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02614 224 Pfam Replication factor A protein 3 1 99 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma10g02614 224 CDD RPA3 6 98 - -
Gma10g02614 224 SUPERFAMILY Nucleic acid-binding proteins 6 98 IPR012340 -
Gma10g02614 224 Gene3D - 2 104 IPR012340 -
Gma10g02614 224 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 1 104 - -
Gma10g02614 224 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02614 Gma-Chr10 53517638 53521899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02614 1 102 Core DNA Replication Machinery Family AT4G18590 58.824 3.41e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02614 K10740 - gmx:100781484 212.616