Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02593 ATGCAAAGCTTCAACACAACCGAATCAGAATCGACCTCACCTCTATATTCCCATTCTCCCTTCTATCACCGGGGAAATGACCCCAGCCGAAATCCAACGCGTTTCTCGGATCTTCAGCATTCTTTTCGGCAACACGATGCCGTTGATTTAAGCTCAAGTTCTGTGTTTGGTGCAAAGTCGAGCAATGTGGCTGTTGTTGCAAGCAACTTGCAGTGTGGGACATTCAACACGAACCTTGGGTGTGCAGAATTTGGTTCGATAGAGCAGCGAGGCATGTTTCAGAGAGGAACCAATAGCGCCACCACCGTGTCCATGGGGAACCGGCACGTTGAGAACTGGGCAGAAGATAGCCAACACACTGAAGATACTTGCACAGATATAGACACCGATGATAAAAACCAATGTTTCTCAACTGTGTCTTGGTGCAATGGAGTTGGGGACGGGGCACTTGTAGTTGTAGACTCACAGGATCAAAGTAAGACTAAGGTTAAAGCTGAAGACCAGAAGACCGTACGTAGGCTAGCTCAGAATCGTGAGGCTGCTAGGAAGAGTCGGTTGAGGAAAAAGGCATATGTGCAACAGTTGGAGACCAGTCGAGTTAGACTTGCGCAATTAGAGCAAGAACTTCAACGGGCACGTCAGCAGGGTGCATTTATTGCAACTGGAAACCAGGGGGATCGCAGtcattctgctgttggaaatgGTGCCCTAGCATTTGACATGGACTATGCCCGTTGGTTTGATGAGCATCAACGGCTGATCAATGATATAAGATCAGCTATAAATTCTCAAATGGATGAGAATGAACTGCACCTTCTTGTAGATGGAGTGATGGCACATTATGATGAATTATTTAGGTTGAAGAGCATAGGGGCAAAGGCTGATGTATTTCACATACTTTCTGGGATGTGGAAGACACCTGCAGAAAGATGCTTCATATGGCTCGGTGGTTTTCGATCTTCGGAACTTCTCAAGATAGTTAGAAACCAGCTTGAGCCGTTAACCGAACAGCAGTTGATGGGCATTTACAATCTGCAGCAGTCTTCCCAGCAGGCTGAGGATGCATTATCACAAGGCATGGATGCATTGCAGCAGTCTCTTTCAGAGACACTTTCTTCCTCCTCTTTAGGGCCCTCTGGTTCTGGAAATGTTGCTGAGTACATGGGCCAAATGGCAATTGCACTGGGCAAGCTGGCCACACTAGAGAATTTCCTTCATCAGGCTGACCTATTGAGGCAACAAACTCTGCAACAGATGCGTCGAATTTTGACCACTTTCCAAGCTGCTCGTGCGCTACTTGTGATAAATGATTACGTTTCACGGCTTAGAGCTCTTAATTCATTATGGTTAGCGTGTCCTAGAGAGTACTAG 1371 0.461 MQSFNTTESESTSPLYSHSPFYHRGNDPSRNPTRFSDLQHSFRQHDAVDLSSSSVFGAKSSNVAVVASNLQCGTFNTNLGCAEFGSIEQRGMFQRGTNSATTVSMGNRHVENWAEDSQHTEDTCTDIDTDDKNQCFSTVSWCNGVGDGALVVVDSQDQSKTKVKAEDQKTVRRLAQNREAARKSRLRKKAYVQQLETSRVRLAQLEQELQRARQQGAFIATGNQGDRSHSAVGNGALAFDMDYARWFDEHQRLINDIRSAINSQMDENELHLLVDGVMAHYDELFRLKSIGAKADVFHILSGMWKTPAERCFIWLGGFRSSELLKIVRNQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLSSSSLGPSGSGNVAEYMGQMAIALGKLATLENFLHQADLLRQQTLQQMRRILTTFQAARALLVINDYVSRLRALNSLWLACPREY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02593 456 ProSiteProfiles DOG1 domain profile. 236 452 IPR025422 GO:0006351|GO:0043565
Gma10g02593 456 PANTHER TRANSCRIPTION FACTOR TGA9 42 455 - -
Gma10g02593 456 SMART brlzneu 165 228 IPR004827 GO:0003700|GO:0006355
Gma10g02593 456 Gene3D - 168 218 - -
Gma10g02593 456 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 167 211 IPR004827 GO:0003700|GO:0006355
Gma10g02593 456 CDD bZIP_HBP1b-like 169 221 - -
Gma10g02593 456 Pfam Seed dormancy control 254 328 IPR025422 GO:0006351|GO:0043565
Gma10g02593 456 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 42 455 - -
Gma10g02593 456 MobiDBLite consensus disorder prediction 1 36 - -
Gma10g02593 456 SUPERFAMILY Leucine zipper domain 169 212 IPR046347 GO:0003700|GO:0006355
Gma10g02593 456 Coils Coil 188 215 - -
Gma10g02593 456 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 172 187 IPR004827 GO:0003700|GO:0006355
Gma10g02593 456 Pfam bZIP transcription factor 168 208 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02593 Gma-Chr10 53331431 53335611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02593 12 455 bZIP Transcription Factor Family AT1G68640 54.741 2.32e-156 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma10g02593 DOG1 2.1e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02593 10 53331431 53335611 Gma20g01097 20 37641084 37645009 GST