Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02588 ATGCCCCCAGGTCCTCTATCTGTTCCAATATTTGGTAACTGGTTACAAGTTGGCAATAACCTTAACCACCGTCTTCTAGCATCAATGTCACAAACCTATGGTCCTGTGTTCCTACTCAAACTAGGTTCCAAAAACTTAGTTGTTGTCTCTGATCCCGAGCCTGCCACCCAAGTGCTCCACGCACAAGGCGTGGAATTTGGGTCTCGCCCGCGAAACGTTGTGTTTGATATCTTCGCGGGGAATGGGCAAGACATGATTTTCACTGTCTACGGTGACCATTGGCGCAAAATGCGTAGAATAATGACGCTGCCATTCTTCACCAACAAGGTCGTCCACAACTACAGCAACATGTGGGAGGAGGAGATGGACTTGATGGTGCGTGACCTGAACATGAACGACAGAGTGAGGAGCGAAGGGATAGTTATCAGAAGGCGGCTTCAGTTGATGTTGTACAATATCATGTACAGGATGATGTTTGATGCCAAGTTTGAGTCTCAAGAGGACCCTTTGTTCATTCAAGCCACCAGGTTTAACTCTGAGAGAAGTCGTTTGGCACAGAGTTTTGAATACAATTACGGGGATTTTATACCATTGCTCAGGCCATTCTTGAGAGGCTACCTCAACAAGTGCAAGAACTTGCAGTCTAGGAGGCTGGCGTTTTTCAACACCCACTACGTTGAGAAAAGAAGACAAATCATGATTGCTAATGGGGAGAAGCACAAGATCGGTTGTGCAATTGATCATATCATAGATGCTCAGATGAAGGGAGAAATCAGCGAAGAGAATGGGATCTACATAGTAGAAAACATCAATGTTGCAGCAATTGAAACAACATTGTGGTCCATGGAGTGGGCAATAGCAGAGTTGGTCAATCATCCAACCATCCAAAGCAAGATTCGTGATGAGATATCAAAAGTGCTTAAAGGGGAGCCAGTAACAGAATCCAACCTACACGAGCTACCATACTTACAAGCCACTGTGAAAGAGACATTGAGACTTCACACACCAATTCCTCTTCTGGTGCCCCACATGAATCTGGAAGAAGCAAAGCTAGGAGGGCACACTATTCCAAAAGAGTCAAGGGTGGTGGTGAATGCTTGGTGGCTTGCCAACGACCCATCATGGTGGAAGAATCCAGAAGAGTTCAGGCCAGAAAAGTTCTTGGAAGAGGAATGTGCAACAGATGCAGTTGCAGGAGGAAAAGTTGACTTTAGGTTCGTGCCATTTGGCGTGGGAAGGAGGAGTTGCCCTGGGATCATACTTGCATTGCCAATATTGGGGCTGGAAAGTTGGTGA 1296 0.4614 MPPGPLSVPIFGNWLQVGNNLNHRLLASMSQTYGPVFLLKLGSKNLVVVSDPEPATQVLHAQGVEFGSRPRNVVFDIFAGNGQDMIFTVYGDHWRKMRRIMTLPFFTNKVVHNYSNMWEEEMDLMVRDLNMNDRVRSEGIVIRRRLQLMLYNIMYRMMFDAKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKNLQSRRLAFFNTHYVEKRRQIMIANGEKHKIGCAIDHIIDAQMKGEISEENGIYIVENINVAAIETTLWSMEWAIAELVNHPTIQSKIRDEISKVLKGEPVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGHTIPKESRVVVNAWWLANDPSWWKNPEEFRPEKFLEEECATDAVAGGKVDFRFVPFGVGRRSCPGIILALPILGLESW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02588 431 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 428 - -
Gma10g02588 431 PANTHER OS02G0467000 PROTEIN 1 428 - -
Gma10g02588 431 Pfam Cytochrome P450 2 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 SUPERFAMILY Cytochrome P450 2 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Gma10g02588 431 Gene3D Cytochrome P450 1 426 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PRINTS E-class P450 group I signature 30 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PRINTS E-class P450 group I signature 54 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PRINTS E-class P450 group I signature 149 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g02588 431 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02588 Gma-Chr10 53303998 53305770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02588 11 428 Monolignol Biosynthesis Gene Families AT2G30490 64.048 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02588 K00487 - gmx:100812188 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02588 10 53303998 53305770 Gma20g01102 20 37676595 37678827 GST