Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02587 ATGGCCACCGATGCCCGTGACTCGCGTCGCAAGCATCACCGATCTTCCTCTCCAGAGGACGTGGACAGATCCTCGAAGCGTCACAAGCACCGCCATAACAGCCATCGCCACCGCCACGGGAGCAAAAAGCGCGACGAAGAGGTTGAATTCGATGATCGAACAATTGCTGCGGTTCCTTCTCCAACTTCGCACAGATATCTCCATGACGACGATGTGGAGGAGGGAGAGATCCTTGAAGATGAGGCTCTCGACGGTGAGGTTGGAAAAAAGGAGACGGAATCTGATGTTGAACCCGGTGAAATCAAGGTGACAGGAGATCGAGATGTTCGATCTGATAATCAAAATTCGGAACCCCTCACTAAAATTTCAGAAACTAGAAATGAAGACATTAGGGATGATAAATTTATTAGTCCTGCAATTGATGCACAAGATGATGTCTCTCCTAATCGTTCAAGTTCTGAGACTCGAGATGGAAAGCATGCTCAAGCTCGTACAGATGGTGTGGGCAATGGTTATTTGGATCCTAAATCTTCCAAAGGGGATAAGTGGCAGAATGGGGAACTTGGACATTTTAAAGGTAATGAGAAACTAAAAGGTGACTTTCATGACCCAACACTGGAGGCTAACGTGAGGAAAGCACATTACCATAGGAATTCATCCTCCGAAAGTGGAGGGGAAAAGTATAGAATGTCAGGAAGTTCTCCTTCTCATGGTAGATATAGAAGTCGATCAAGATCAATTGGTCATACTAGAGACAGGTCTCGCTCTCGTAGTATCATAGACGAATATCCTCATTCTAAGAGAAGGCGCTTTGACTATGACCATGATGAGGAAAGAGTGAGGGCACGTGGAAGGGAGCATGGTCATGGCAGTGTGGTAGATGATAGAAGGGAATACGGTATCAGATATCACAATCGAGAGGCCAGGGATAGAGATGTGGATAGAGACTTGCACGGAGAAAAGAAGCAAGAGGAAACTAGCAGGGGTAAAGAGATTGAGTGGGAACACAAAAGGGGAAAGGAACGTGAAAGGAGCCGTGATAGGTATAGAAGGGATATAGAAAAAGATAGGAGCAGGGAGAGGGAGGAGGATAGGGACAGGAGACAAGAAAAGGAAAGAGATAGGAGCTGGGATACAGTGATGGAGAGGGATAGGAGAAGGGAAAAGGAAAGAGATAGAAGTAGGGACAGAATAAGAGGTGGCAAGAGAGATAAAGACCCAGAGAATGAAAGGGATGATAAGCATCGGGCAAGAGATAATATTAAGAAGAGGGAAAGACATGATGATAAATATAGGCACAAAGATAGAGACACTGCTAATGGTAAGAATAGGCATCTGCATCATGAGGATGGTGACGACAATGGAGATAGATATAGAAAACATTCAAGGCATGAAGAAAATGAATATCGTTGGGAAAGAAAAAGAAATTCTGATAATCCTGTAAAGGTTTATAGCTCAATGGGAAGTACTGCAGAAGTGGGTGAAAGCAAACTAACAAGCAGTGAGGTTGAACCAGATGACTTAGAGGAGGATACATTACAATTACCTGAGCAAGAAGAGGAAGATCTCAACAGGATCAAAGAAGAGAGTAGAAGAAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGCATCAGCAAGTAGAAGAAGCGGTTGGAAATGAAGGAAACGacaagaaggcagCCATTCCTAATGACATCTCTGAAGCTCGTGATGGTAAAAATGATGATGCTGATTATTTGGAGCCATCATTTGCTGTTGGGAAATCTCCTGAAAATGTGAATGTTGCTTCTAAGAAGATGTCTCCTGCTGGAGGTCTGGGAGAGGGTACTCCAAAGAGTGAAAGGTCAGAGGACAAGTTTTGTGATGATATATTTGGTGAGACGCCAACGGGAGTTCGGAAATCAGGAAAAGGAGATGGTTTACTGATTGAGAGGGCTGGCCTACATGACAATTGGGACGATGCAGAGGGTTATTATAGCTATCGTATTGGTGAAATACTTGATGGCCGATATGAAGTCACTGCTGCACATGGGAGGGGTGTCTTTTCAACAGTTGTTCGCGGAAAGAATCTAAAGATGGGAAATGGTGAGCCAGAAGAAGTAGCCATAAAAATTATTCGTAGTAATGACACCATGTACAAGGCTGGTATGGATGAATTGGTCATATTGAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAGATACAGGAATCATCTTTGTTTAGTTTTTGAATCTCTAAATATGAATCTGCGAGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATACGCAAAACAGCTTTTTATTGCTCTGAAGCATCTCCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAATATGTTGGTAAATGAGTCTAAAAATGTTTTGAAGCTTTGTGACTTTGGCAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTTGTGAGTCGTTTTTATCGTGCCCCGGAAATAATACTTGGCTTGCCATATGATCATCCATTGGATATTTGGTCTGTAGGTTGTTGTTTGTATGAGTTGTATATAGGGAAGGTTCTTTTCCCAGGTCTTACAAACAATGACATGCTACGGCTTCACATGGAACTGAAGGGTCCTTTTCCAAAGAAGATGCTGCGTAAGGGAGCATTTACTGAACAGCATTTTGATCAGGATCTGAATTTTCTTGCTACTGAGGAGGATCCTGTAACAAAAAAGACCATAAAGCGGCTGATACTCAACATTAAGCCAAAAGATATTGGGACACTCATTACTGGCTCTCCTGGGGAGGATCCAAAAATGTTAGCCAACTTTAAGGATCTTCTGGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGGCTGACAGTGTCACAAGCTCTGAACCACCCATTCATCACTGGCGTACACTTTACTGGCGGTTCTTTCAGTGGAATGTACTGTTTCTATTGCATCCCTTCCATGCTTAGATGCTTAAAAGCAACCCAGGAGAAGGCAATTCCACTGGATGTGTTTCGCTGTGTTCTTGAAGCGAATTCATTTCATGGTCGTGCATCTTGGCCCTGCAATTTTTATGGGGTTTAG 3147 0.4277 MATDARDSRRKHHRSSSPEDVDRSSKRHKHRHNSHRHRHGSKKRDEEVEFDDRTIAAVPSPTSHRYLHDDDVEEGEILEDEALDGEVGKKETESDVEPGEIKVTGDRDVRSDNQNSEPLTKISETRNEDIRDDKFISPAIDAQDDVSPNRSSSETRDGKHAQARTDGVGNGYLDPKSSKGDKWQNGELGHFKGNEKLKGDFHDPTLEANVRKAHYHRNSSSESGGEKYRMSGSSPSHGRYRSRSRSIGHTRDRSRSRSIIDEYPHSKRRRFDYDHDEERVRARGREHGHGSVVDDRREYGIRYHNREARDRDVDRDLHGEKKQEETSRGKEIEWEHKRGKERERSRDRYRRDIEKDRSREREEDRDRRQEKERDRSWDTVMERDRRREKERDRSRDRIRGGKRDKDPENERDDKHRARDNIKKRERHDDKYRHKDRDTANGKNRHLHHEDGDDNGDRYRKHSRHEENEYRWERKRNSDNPVKVYSSMGSTAEVGESKLTSSEVEPDDLEEDTLQLPEQEEEDLNRIKEESRRRREAIMEKYKKQHQQVEEAVGNEGNDKKAAIPNDISEARDGKNDDADYLEPSFAVGKSPENVNVASKKMSPAGGLGEGTPKSERSEDKFCDDIFGETPTGVRKSGKGDGLLIERAGLHDNWDDAEGYYSYRIGEILDGRYEVTAAHGRGVFSTVVRGKNLKMGNGEPEEVAIKIIRSNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFRYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNESKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYIGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKKTIKRLILNIKPKDIGTLITGSPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGVHFTGGSFSGMYCFYCIPSMLRCLKATQEKAIPLDVFRCVLEANSFHGRASWPCNFYGV 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02587 1048 Gene3D Transferase(Phosphotransferase) domain 1 732 988 - -
Gma10g02587 1048 MobiDBLite consensus disorder prediction 480 497 - -
Gma10g02587 1048 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 355 988 - -
Gma10g02587 1048 MobiDBLite consensus disorder prediction 224 241 - -
Gma10g02587 1048 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Gma10g02587 1048 ProSiteProfiles Protein kinase domain profile. 672 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02587 1048 Gene3D Phosphorylase Kinase; domain 1 642 731 - -
Gma10g02587 1048 PANTHER DUAL SPECIFICITY PROTEIN KINASE 355 988 - -
Gma10g02587 1048 MobiDBLite consensus disorder prediction 122 139 - -
Gma10g02587 1048 MobiDBLite consensus disorder prediction 245 479 - -
Gma10g02587 1048 Coils Coil 531 551 - -
Gma10g02587 1048 MobiDBLite consensus disorder prediction 1 530 - -
Gma10g02587 1048 MobiDBLite consensus disorder prediction 1 26 - -
Gma10g02587 1048 MobiDBLite consensus disorder prediction 82 114 - -
Gma10g02587 1048 MobiDBLite consensus disorder prediction 180 223 - -
Gma10g02587 1048 CDD STKc_PRP4 671 987 IPR044092 GO:0004674|GO:0006468|GO:0045292
Gma10g02587 1048 SMART serkin_6 672 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02587 1048 Pfam Protein kinase domain 674 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g02587 1048 MobiDBLite consensus disorder prediction 599 619 - -
Gma10g02587 1048 SUPERFAMILY Protein kinase-like (PK-like) 659 993 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02587 Gma-Chr10 53291742 53298868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02587 625 996 MAP Kinase Gene Family AT2G18170 30.155 1.87e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gma10g02587 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02587 K08827 - gmx:100784523 1880.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02587 10 53291742 53298868 Gma20g01103 20 37687159 37694311 GST