Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02572 ATGACTTTGTCGTTCCTTTACAGGAGACCAGAACGAAACCCATTAGATCTTAACAATTTGCCCGATGAGTACTCTAGGGATGGCAAACAAGTCCTCGAAGACCATACCTCTTCACCCGGTTGCAGGAAAAAGAAAAGCGGCGGGAAGGATGGAAAAGACGAGTGTGGGAAGGTCTACGAGTGTAGATTTTGTTCCCTCAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGGCTACGATCATATCATTGCTCCACAAGGTGCCCCTCACTTAGGATGCTGCCAGCCAATAGGAACGGGGGGTTATCACCCATCAGGAGACCCAACAGTGCCTCTAAGATTCCCGAGATACTTCTCAGGTTCATCCTCAACTCACATGCCACCACCGCCGCCGCCGCCGCCGCCACCGCCACAATCACACCTATACGCATCACCTTCGAGGCCAGTGTCATTTGGGTCATCACACTTCCCCCACCAGAATGCTGTGAACGATTACTATGTGGGCCACGTGATGAGTGGTGGGAGCCACGGACACTATGTTGGAGGAGAGAGCACGAGTAGTTACACGTACATTGGTGCCCCGGTGGGGCAAGCTGGTGGATTCGCTGGTGGTGGTAAGGAGGGGTCAGCAGTGCAGGAGGAAGGGTTGAGTTGGGGAAGGAGCTATTCAGGAGGAGCACAGCATCGTTTGGATCCTCCCTCAGCGATCAATCGGTTTCATGATGGTTTCTAA 750 0.5333 MTLSFLYRRPERNPLDLNNLPDEYSRDGKQVLEDHTSSPGCRKKKSGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQGYDHIIAPQGAPHLGCCQPIGTGGYHPSGDPTVPLRFPRYFSGSSSTHMPPPPPPPPPPPQSHLYASPSRPVSFGSSHFPHQNAVNDYYVGHVMSGGSHGHYVGGESTSSYTYIGAPVGQAGGFAGGGKEGSAVQEEGLSWGRSYSGGAQHRLDPPSAINRFHDGF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02572 249 MobiDBLite consensus disorder prediction 22 53 - -
Gma10g02572 249 SUPERFAMILY Formin homology 2 domain (FH2 domain) 133 143 - -
Gma10g02572 249 MobiDBLite consensus disorder prediction 1 53 - -
Gma10g02572 249 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Gma10g02572 249 PANTHER ZINC FINGER PROTEIN JAGGED 9 225 IPR045320 GO:0003700
Gma10g02572 249 PANTHER ZINC FINGER PROTEIN JAGGED 9 225 IPR031113 GO:0007275
Gma10g02572 249 MobiDBLite consensus disorder prediction 130 148 - -
Gma10g02572 249 MobiDBLite consensus disorder prediction 110 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02572 Gma-Chr10 53131225 53132974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02572 8 208 C2H2 Transcription Factor Family AT1G13400 35.616 5.05e-19 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma10g02572 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02572 - - gmx:102664687 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02572 10 53131225 53132974 Gma20g01123 20 37916646 37920490 GST