Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02570 ATGAGACTTTCCATTCTGCAACCCCACCCACACACACACCGGTGCCGCTACCCGATAAAGCAGTGGCCCCGTATGGACGCGTCGTTCCACCGCCGCAAAGACAAGGTGGTGGTGATCATGGGCGCCACCGGCTCCGGCAAGTCCCGTCTCTCCATCGACCTTGCAACCCTCTTCCCCACCTCCGAAATCATCAACTCCGACAAAATGCAAGTCTACCGCGGCCTCGACATCACCACCAACAAGATTCCCACCGCCCAGCGCCGCGGCGTCCCCCACCACCTCCTCGGCGACGTCGACACCGATCACTACGGCGAGTTCTCCCCCGCCGACTTCCGCCACCATGCCGCCGACCTCATCGCCGACATCACCCGACGCAAAAACCTCCCGATCGTCGTCGGCGGCTCCAACTCCTTCGTCCACGCCCTCCTCGTCCAAAACTTCGACCCTCACTCTCACTCAAACGTCTTCCAACAACAACAAGAAGAAGCGCTTATATCCTCTGAGTTGAGGTACAGGTGTTGCTTCCTCTGGGTCGATATAGCCTTCCCCGTCTTATCGCAATATTTAAGGGACCGAGTCGACGACATGCTTGACTCGGGGATGGTCGACGAGTTGGCTCAGTTCTTCGACCCGGACGCCGCGCGTCGAACCGGGTTTGGTATCAGAAAAGCCATTGGGGTTCCCGAGTTCGACCGGTTTTTTAATAAATACCCTCCCTCGATGGGCCAGGGGGGCGATGATCCTCTGCGGGAGCGTGCGTACGAGGAGGCGGTGAAGGCGATTAAGGATAACACGTGTGAGTTGGCGGAGCGTCAGATAGGGAAGATCGAACGATTGAAGCGCGCCGGCTGGGACCTACGGAGGATAGACGCGACGGAGGCGTTTCGGATGGTGCTGACGTCAGGGTCGAGCAATGGGTCCGGTGTATGGGAAAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 987 0.5836 MRLSILQPHPHTHRCRYPIKQWPRMDASFHRRKDKVVVIMGATGSGKSRLSIDLATLFPTSEIINSDKMQVYRGLDITTNKIPTAQRRGVPHHLLGDVDTDHYGEFSPADFRHHAADLIADITRRKNLPIVVGGSNSFVHALLVQNFDPHSHSNVFQQQQEEALISSELRYRCCFLWVDIAFPVLSQYLRDRVDDMLDSGMVDELAQFFDPDAARRTGFGIRKAIGVPEFDRFFNKYPPSMGQGGDDPLRERAYEEAVKAIKDNTCELAERQIGKIERLKRAGWDLRRIDATEAFRMVLTSGSSNGSGVWERQVLEPSVKIVKRFLME 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02570 328 Pfam IPP transferase 70 155 - -
Gma10g02570 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 165 IPR027417 -
Gma10g02570 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 327 IPR039657 -
Gma10g02570 328 Gene3D - 33 326 IPR027417 -
Gma10g02570 328 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 26 327 - -
Gma10g02570 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 182 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02570 Gma-Chr10 53079785 53080771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02570 170 326 C2H2 Transcription Factor Family AT2G27760 30.387 2.62e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02570 K10760 - gmx:100813761 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02570 10 53079785 53080771 Gma20g01127 20 37987416 37988369 GST