Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02564 ATGTCCACAATTGCAAAGAGAGATTTGAGTTCTAATGAAGAAGAGAGTGAGCTGAGAAGAGGTCCTTGGACTCTTGAAGAAGACAGCTTACTCATACACTATATTGCTCGTCATGGTGAAGGCCGTTGGAATATGTTAGCCAAAAGTGCAGGATTGAAGAGGACTGGAAAAAGTTGCAGACTTAGATGGCTGAATTATTTGAAACCAGACATTAAGAGAGGGAACCTCACTCCACAGGAGCAACTCTTGATCCTTGAACTCCATTCCAAGTGGGGTAACAGGTGGTCAAAAATTGCTCAGCATCTGCCAGGAAGAACAGACAATGAGATCAAGAACTATTGGAGAACAAGGATACAGAAACAGGCACGCCAACTTAACATTGAATCTGGTAGCAAGAGATTCATTGATGCTGTCAAGTGTTTTTGGATGCCAAGATTGCTCCAAAAGATGGAACAGAGCAATTCTCCAAGCCCTCATCACTCTTCCATGACAAACATGATGAATTTAGGGAATTCCGGAGAAGCTTCTATGAGTTCAATGTCAAGCAGCTTCAATATTAATCCTTCTATGTCTTCTTCCTCATCTCCTCCACAAAGGGAATTTATTATGGATGATGCAAATCATTTTAATACTATGTCCAACCCCATCAATCCATCCCCAGATTCCTTCCAATTTTCACAGCTACTTGAAATTTCTGAACACCCCAAAAGTCCTTCAAATGTGTTTGAGAACAATGTTTGCAGTTATCCAATCCAGGACAATTGCTATGTTGATACCAATAACTATGGCATGGAAGGCATAAACATGGATCCCCTTTCAGCAATGGATACTTACGACTTCCCACAGTTTGATTTTCAGACAGCAGGAAATGGATGGATGCTAGACAGCATGGGGGATTCTACTTTATGGAACATGGAGGCTATGTGA 927 0.4132 MSTIAKRDLSSNEEESELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRIQKQARQLNIESGSKRFIDAVKCFWMPRLLQKMEQSNSPSPHHSSMTNMMNLGNSGEASMSSMSSSFNINPSMSSSSSPPQREFIMDDANHFNTMSNPINPSPDSFQFSQLLEISEHPKSPSNVFENNVCSYPIQDNCYVDTNNYGMEGINMDPLSAMDTYDFPQFDFQTAGNGWMLDSMGDSTLWNMEAM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02564 308 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 6 307 - -
Gma10g02564 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Gma10g02564 308 MobiDBLite consensus disorder prediction 1 20 - -
Gma10g02564 308 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Gma10g02564 308 SMART sant 19 69 IPR001005 -
Gma10g02564 308 SMART sant 72 120 IPR001005 -
Gma10g02564 308 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 35 44 IPR001345 GO:0003824
Gma10g02564 308 Gene3D - 76 119 - -
Gma10g02564 308 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 6 307 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gma10g02564 308 CDD SANT 77 116 IPR001005 -
Gma10g02564 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
Gma10g02564 308 MobiDBLite consensus disorder prediction 151 197 - -
Gma10g02564 308 CDD SANT 22 67 IPR001005 -
Gma10g02564 308 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Gma10g02564 308 Gene3D - 17 73 - -
Gma10g02564 308 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Gma10g02564 308 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Gma10g02564 308 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02564 Gma-Chr10 53031816 53032969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02564 15 283 MYB Transcription Factor Family AT1G68320 50.871 1.02e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma10g02564 Myb_DNA-binding 3.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02564 K09422 - gmx:100780759 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02564 10 53031816 53032969 Gma20g01132 20 38057570 38059169 GST