Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02558 ATGGAAACCACCCAACTTGACTACAACACTAAAAAAACAAACCCCACTTCCCCAACGCGCTTGAAGCTCTTCGGTTTCAGCGTACACCACGAAGACATCATGGACGAAGACGAGGTGGCGCATGATAACGTGGCAGACTCCACCACCAAGGTCACTTCTTCCACTTCCCCTTCTTCCCCGTCTGACTCGCCGGACTCCTCCGTCGCCGGTGCCGGACCACCTTCCTCCGCCGACCGGAAATACGAGTGCCAATACTGCTGCCGAGAGTTCGCAAATTCACAAGCACTTGGCGGACACCAGAACGCGCACAAGAAGGAGCGTCAGCAGCTGAAGCGGGCGCAGTTACAGGCCTCCCGAAACGCCGCCGTTTCGTTCGTTCGGAATCCGATGATCTCCGCCTTCGCCCCTCCGCCGCACCTTCTGGCTCCGCCGGGGACCGTGGTGGTCCCGGCGGCACCTCCCTCGTGGGTGTACGTGCCACCACGTGCCGCGCCTCCTCCCTTCCACGTGTCAGTGTCGCACGGTTGTGCGTTCCcgtcggcgcctggcaacagcaacaacaacggcttcagcagcagtagtagtaataatagtaataacgtgaccataacaacggGTGTGAAATCTGCGGGTGCTGGGATGTTTCCCTATGTTGGCGTTGTAGGAGATTCTTCGTCATTAGCTTTGTCAACGGTGCAGGTTCAGGCCCGGGCCCACCACGCTAGGATTGATGGGCCCTCTTTGAGTAGGTTTTCCAAAGGTGACAGTGGGCCCAAATTTGATGATGCATGGGGCTTGGACTTGCACCTTAGTCTTGCGCCAGCTGCGCCCTCATCTCTCGGCTCGGCTTGA 852 0.5329 METTQLDYNTKKTNPTSPTRLKLFGFSVHHEDIMDEDEVAHDNVADSTTKVTSSTSPSSPSDSPDSSVAGAGPPSSADRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPMISAFAPPPHLLAPPGTVVVPAAPPSWVYVPPRAAPPPFHVSVSHGCAFPSAPGNSNNNGFSSSSSNNSNNVTITTGVKSAGAGMFPYVGVVGDSSSLALSTVQVQARAHHARIDGPSLSRFSKGDSGPKFDDAWGLDLHLSLAPAAPSSLGSA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02558 283 MobiDBLite consensus disorder prediction 45 70 - -
Gma10g02558 283 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Gma10g02558 283 Gene3D Classic Zinc Finger 64 128 - -
Gma10g02558 283 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Gma10g02558 283 PANTHER ZINC FINGER PROTEIN 5 11 277 IPR044299 GO:0010090
Gma10g02558 283 PANTHER ZINC FINGER PROTEIN GIS3 11 277 - -
Gma10g02558 283 SUPERFAMILY beta-beta-alpha zinc fingers 78 108 IPR036236 -
Gma10g02558 283 MobiDBLite consensus disorder prediction 41 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02558 Gma-Chr10 52952756 52953872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02558 5 276 C2H2 Transcription Factor Family AT1G68360 42.955 4.48e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02558 - - gmx:100811796 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02558 10 52952756 52953872 Gma20g01138 20 38144770 38145615 GST